| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3007 |
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| Symbol | |
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| ID | 4689606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3174400 |
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| End bp | 3176121 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639836020 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_983227 |
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| Protein GI | 121605898 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGAC TCAAACCAAC GACGGGCCTG TCCGCCATGC TTGCAGTGTG TGTTTTTGGC
GCTGCGAACG CGCAGGAAAT CCAGCAGCAA AAAGGCAAGA GCGCCGCACC GGCGGCCATC
GGGACCGTCA ACGTGTCGCA GGCGCAGTTG AGCAACTCGG GCCAGCAGGG CAAGGACTGG
CTGCAGACCA ACGGCGGCTA TGCGCAGACC CGGTTTTACC CCGGCAGGCA GATCAACACC
GGCAACGTCA AGAACCTCAG GCCGGAATTC AGCTTTCAGA CCGAGGTCCG CGAGTCGATG
GAAACCGCGC CCATCGTGGT CGATGGCGTG ATGTACATGA CCACGTCCTA CAACCATGTC
TATGCGCTGG ACGCCACGAC GGGCAGGGAA TTCTGGCATT ACAAGCACAA GATGGGGCCG
ATCACCACCT TCTGCTGCGG CCCCAACAAC CGGGGCGTCG CCATCGAGGG CGGCAAGCTG
TTCATGGGCA CCCTGGACGC CAAACTGGTG GCGCTTGACG CCCAAAGCGG CAAGGTTCTG
TGGGAAACCC AAATCGCCGA CCCCGAGAAG GGCTACAGCG AAACCATGTC GCCCACCGTG
GTCGAGGGCA AGGTGCTGAT CGGCACCAAC GGCGGCGAAT ACGGCATTCG CGGCTTCGTC
AAGGCCTTTG ACGCCAGGGA CGGCAAGCTG CTCTGGACCT TCTACACGAT TCCCGAGCAG
GGCCATGAAG GCGTTTGGGC CGAGAACGAC GCCACCGGCC GCAATATGCA CCGCGACATC
AAGGCCGAGA AAGAGGAACT GGCGCGCAAT AGCAGCTTCT ACCAGACCCT GGGCGGCGGC
GTCTGGATGA ACCCGGCGGT TGACCTCAAG ACGCGCACGA TTTTCTTCGT CGTGGGCAAT
CCGTCGCCCG ACCTGTACGG CGCCGAACGG CCGGGCGACA ACCTGTACAC CGACTCGCTG
GTGGCGCTGG ACCTGGACAG CGGCAAGTAC AAGTGGCATT CCCAGTACGT GGCCCATGAC
GTGTGGGACC TGGACGCCGT GAGTCCGCCC ATCCTGATGG ATGTGAAGGA CAAGTCCGGA
AAAATGATTC CGGCCGTGCT TCATGGCGGC AAGACGGGGC ATGTCTATGT GCATGACCGC
AAGGACGGCA AGCTGATCCG CTTTTCCGAA GCCATGATTC CGCAGGAAAA CATGTGGGTG
CTGCCGACGG CACAGGGCGC ACGCATGCTG CCGGGCGCCA ATGGCGGCGT GGAATGGTCG
CCGATGGCGG TCAACGAAAA GCTTCGCCTG GCCTATGCCC TCAACCTGCA CCAGCCCATG
ACCTACCACG TCGAAAAGGC GGCCTATCCG GGCGGCAAGC TGTGGCTGGG CGGCGCCTTC
AAAACCATCG AAGGCGAGGA GCAGTGGGGA CGCGTCGCGG CGGTCAATGT CGATACCGGC
AAGATGGCGT GGAAGTTCGA CACCGCGCAG CCCCTGATCG GCGGCGCGCT GGCCACCGCT
GGCGACCTGC TGTTCTACGG CGAGGGCAAC GGCCTGTTCC GCGCGCTTGA CGCCAGGAAC
GGCAAGCTGC TCTGGGAATA CCAGTGCGGC GCGGGCGCCA ACGCCATGCC GGTGTCCTAT
ACGGTCAAGG ACCGCCAGTA CATCGCCATG GGCTGCGGCG GCAACACCCA GCTCGACTTC
AAGCGCGGCA ACACCATGTT CGTCTATGCG CTGCCCAGGT AA
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| Protein sequence | MIRLKPTTGL SAMLAVCVFG AANAQEIQQQ KGKSAAPAAI GTVNVSQAQL SNSGQQGKDW
LQTNGGYAQT RFYPGRQINT GNVKNLRPEF SFQTEVRESM ETAPIVVDGV MYMTTSYNHV
YALDATTGRE FWHYKHKMGP ITTFCCGPNN RGVAIEGGKL FMGTLDAKLV ALDAQSGKVL
WETQIADPEK GYSETMSPTV VEGKVLIGTN GGEYGIRGFV KAFDARDGKL LWTFYTIPEQ
GHEGVWAEND ATGRNMHRDI KAEKEELARN SSFYQTLGGG VWMNPAVDLK TRTIFFVVGN
PSPDLYGAER PGDNLYTDSL VALDLDSGKY KWHSQYVAHD VWDLDAVSPP ILMDVKDKSG
KMIPAVLHGG KTGHVYVHDR KDGKLIRFSE AMIPQENMWV LPTAQGARML PGANGGVEWS
PMAVNEKLRL AYALNLHQPM TYHVEKAAYP GGKLWLGGAF KTIEGEEQWG RVAAVNVDTG
KMAWKFDTAQ PLIGGALATA GDLLFYGEGN GLFRALDARN GKLLWEYQCG AGANAMPVSY
TVKDRQYIAM GCGGNTQLDF KRGNTMFVYA LPR
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