| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3000 |
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| Symbol | |
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| ID | 4687439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3165551 |
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| End bp | 3166744 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639836013 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_983220 |
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| Protein GI | 121605891 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC CCGCCAGCCC CGCACCCCGC CTCCCCGCCG CCATCTGGGC GCTAGGCTTT
GTCAGCTTGC TGATGGACAT TTCCTCCGAG ATGATTCACA GCCTGCTGCC GGTGTTCATG
GTCACGGTGC TGGGAACGAG CGTCTGGGCC GTCGGGCTGA TCGAAGGCGC TGCCGAGGCG
ACGGCGCTGA TCGTCAAGGT GTTTTCGGGC GTGCTCAGCG ACTACTGGGG CAAGCGCAAG
CCGCTGGCGG TGCTGGGCTA CGGGCTGGGC GCCGCCTCCA AACCGCTGTT TGCGCTGGCG
TCCACGACCG GCATGGTGCT GGCCGCGCGG CTAATCGACC GTGTCGGCAA GGGCATTCGC
GGCGCGCCGC GCGATGCGCT GGTGGCCGAC CTGGCGCCGC CCGGCATGCG CGGCGCGGCG
TTCGGGCTGC GCCAGTCGCT CGACACCGTG GGCGCGTTCA TCGGCCCGCT GCTGGCGATG
GGCCTGATGC TGCTCTGGGC GAATGACTTC CGGGCGATTT TCTGGGTGGC GATGGTGCCC
GGCTTCATGG CGGTGGCCTT GCTGCTGCTG GGCGTGCAGG AGCCTGCGCC GGCCGGACCT
GTGCCCGCCG CCAGGCCCAA CCCGATCAGC CGGGACAACC TGCGGCGGCT GGGCAGCGCC
TACTGGCGCG TGGTCTTCAT CGGCGCGCTG TTCACGCTGG CGCGCTTCAG CGAGGCTTTT
CTGGTGCTGC GGGCCTTGCA GGGCGGAATG CCGGTGGCCT GGACGCCGCT GGTGCTGATC
GGCATGAACG TCGTCTATGC CCTGGGCGCC TACCCGTTCG GGAAACTGTC GGATTCCGTC
AGCCACACCG CCCTGCTGGC CTGGGGTCTG GTGGTGCTGA TTGCCGCCGA TGCCGTGCTG
GCCACCAGCA GCCACTGGAC CTGGGTGGCC GCCGGCATTG CGCTCTGGGG GCTGCACATG
GCGATGACGC AGGGCTTGCT CGCCACCATG GTCGCCCAGG TCGCGCCGCC CGACTTGCGC
GGCACGGCCT TTGGTTTTTT CAACCTCATG AGCGGCCTGG CAATGCTGCT GGCCAGCACC
GTGGCGGGCG TGCTGTGGGA CCAGCTGGGC GCGCCCGCCA CCTTTGTCAC CGGCGCCGTG
TTCAGCCTGG CGGCGCTGGC GCTGCTGTGG CACTGGCGCG GCATGCATCG GTAA
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| Protein sequence | MTQPASPAPR LPAAIWALGF VSLLMDISSE MIHSLLPVFM VTVLGTSVWA VGLIEGAAEA
TALIVKVFSG VLSDYWGKRK PLAVLGYGLG AASKPLFALA STTGMVLAAR LIDRVGKGIR
GAPRDALVAD LAPPGMRGAA FGLRQSLDTV GAFIGPLLAM GLMLLWANDF RAIFWVAMVP
GFMAVALLLL GVQEPAPAGP VPAARPNPIS RDNLRRLGSA YWRVVFIGAL FTLARFSEAF
LVLRALQGGM PVAWTPLVLI GMNVVYALGA YPFGKLSDSV SHTALLAWGL VVLIAADAVL
ATSSHWTWVA AGIALWGLHM AMTQGLLATM VAQVAPPDLR GTAFGFFNLM SGLAMLLAST
VAGVLWDQLG APATFVTGAV FSLAALALLW HWRGMHR
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