| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2925 |
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| Symbol | |
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| ID | 4689633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3079179 |
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| End bp | 3082700 |
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| Gene Length | 3522 bp |
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| Protein Length | 1173 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639835932 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_983145 |
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| Protein GI | 121605816 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.917555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCA TGTTTGTCCA TCTAAGAATC CACACCGAGT TTTCAGTCGT TGACGGTACC
AACCGCATTG ATGAAATTGT TGCCGCCGCT GCCGCCGACC AGCAACCCGC GCTGGCCATT
ACCGACCTGA GCAACCTGTT TGGCACGGTC AAGTTCTACA AGGAAGGGCG CAAGACGGGC
GTCAAGCCGC TGATCGGCGC CGACATCTGG CTCGAAGCGC CCGGCAAGGA AGCCGGCGCG
CCGGCTTCCC GCCTCTTGCT GCTGGTGCAG GACAGCCAAG GCTACCTCAA CCTGTGCGAG
CTGATCACCC GCGCCTGGAC AAAAAATGTG GTGCGCGACC AGGCGGTCGT CAAGCTGCAA
TGGCTGCAGG AGTTGAACGA AGGCCTGATC GCCCTGTCGG GCGCGCAGCG CGGCGCCGTG
GGCCAGGCCT TGGTGCAGGG CGACAGCGCA CGGGCCATGG AGTGCGCGCT GCATCTGTCG
GGCATGTTTC CCCGGCGCTT CTACCTGGAG CTGCAGCGCT CAGGGCATCC CGAGGACGAA
CGCCATGTCA CCGCCGCCGT GCAACTGGCG GCGCGGCTGA AGTTGCCGGT GGTAGCCACG
CATCCGGTCC AGTTCCTGAC CTATGACGAC TACGAGGCGC ATGAAGCGCG TGTCTGTATT
TCAGAAGGCG AAATCCTGGG CAATGCACGC CGCGTGCGCA AGTTCACCCG CGAGCAGTAT
TTCAAGTCGG CTGACCAGAT GAAGGCGCTG TTTGCCGATG TGCCGTCGGC GCTGGCCAAC
ACGGTCGAAA TCGCCAAGCG CTGCAGCCTC ACGCTGGAAC TGGGCAAGCC CATGCTGCCC
GAATTCCCGA CGCCCGAAGT CAATGGCTCT CGCATGCCGC CTGAAGACTA CTTTCGCCAC
ACCTCGTTCG AGGGGCTGGA AGAGCGGCTG CTGCACCTGT ACCCGAACCC GGCGCAGCGC
GACGCCAAGC GGCCCGAATA CGTCGCGCGG CTCGAATTCG AGATCAATAC CATCCTGAAG
ATGGGTTTCC CCGGCTATTT CCTGATCGTT GGCGACTTCA TCCAGTGGGC CAAGAACAAC
GGCTGCCCGG TCGGGCCGGG ACGCGGCTCC GGCGCCGGCT CGCTGGTCGC CTATGCGCTG
AAGATCACCG ACCTCGACCC GCTGCGCTAC AACCTGCTGT TCGAGCGCTT CCTGAACCCC
GAGCGCGTCT CGATGCCCGA CTTTGACATC GACTTTTGCC AGAGCAACCG CGACCGCGTG
ATCGACTACG TGAAGGACAA GTACGGCCAT GCGGCGGTCA GCCAGATCGT CACCTTCGGC
ACCATGGCGG CGCGCGCGGC GATTCGCGAC GTCGGCCGGG TGCTCGATTT CCCCTACGGC
TTTTGCGACG GCATTTCCAA GCTGATTCCG AACAAGCCCG GCCAGGCGGT GACGCTGCAA
CTGGTGCCGG CCGACCGCAA GAAAAATGAC AAGATGGTCT ATGCGCTGGA GGCCGAACCG
GTGCTGGCCG ACCGCGAAAG CAAGGAGGAA GACGTTCACA CGCTGCTCGA CCTCGCGCGC
AAGCTCGAAG GCCTCACGCG CAATGTCGGC ATGCATGCCG GCGGCGTGTT GATCGCGCCG
GGCAAGCTGA CCGATTTTTG CCCGCTGTAT CTGCAGCCCG GCAGCACGTC GGCGGTCAGC
CAGTTCGATA AGAACGACGT GGAGGCGATT GGCCTGGTCA AGTTCGACTT CTTGGGGCTG
GCCACGCTGA CCATCCTGGA AATTGCGCGC GAGTTCATCA TCGCGCGCTA CCCGGCGCAA
AAAGACTTCA AGTTCGAAGA CCTGCCGCTC GACGATGCGC GGGTGTACCG GCTGTTTGCC
GACGGCAATA CCGAAGCCGT GTTCCAGTTT GAAAGTATCG GCATGCAGCG CATGCTCAAG
GACGCCCGGC CCGACCGGCT CGAAGACCTG ATCGCGATGA ACGCGCTCTA CCGTCCCGGC
CCGATGGACC TGATTCCGAC CTACATTGCC CGAAAGCAGG GCAAGGAAGT GCCCGAATAC
CCGGACCCGC GCGTCAAGCC GATGCTGGAG GAAACCTACG GCATCATGGT CTATCAGGAG
CAGGTGATGC AGACCGCGCA GATCCTGGGC GGCTACTCGC TGGGCGGCGC CGACATGCTG
CGCCGCGCGA TGGGTAAAAA AGACGAGAAG GAGATGGCCC AGCACCGGGA AATCTTCCGC
AAGGGCGCCG GCATCAACGG CCTGGCGCAG GAAAAAGCCG ACGAGGTGTT CGACCTGATG
GAAAAGTTCG CGGGCTACGG CTTCAACAAG TCGCACTCCG CCGCCTACGC GCTGCTGGCC
TACCACACGG CCTGGCTCAA GGTACATTTT CCGGCCGAGT TTTTCGCGGC CAACATGACC
GTCGAAATGG ACGACACCGA CAAGCTAAAA ATCCTGTTCG GCGACGCGCA AAAGATGGGG
CTGAGCTTCG AGGTGCCCGA CATCAACCAG GGCGACTACC GCTTCGAGCC GATCACCGCC
AAATCGGTGC GCTACGGCCT GGGCGCGATC AAGGGCACCG GCCAGCAGGC GATTGCCGCC
ATCGTCGCCG CGCGCAAGGA AGGCGGCCCG TTCACCTCGC TGTTTGATTT TTGCGTGCGC
GTGGACCGCA GCAAGATGAA CAAGCGCACG GTCGAAGCGC TGATCAAGGG CGGCGCCTTC
GACAGCCTGC ACCTGAACCG CGCCGAGCTG CTGGCGTCCA GCGAGCGCGC TTTCGATTTT
GCCGCCGCCA CGCAAGCCAA CGCCAACCAG GGCGGGCTGT TCGACATGTC CGACTCGCAC
GCGGCCAGCA CGCAGGAGCC GGAACTGGTC GAGATGCCGA TGTTCGGCGT CAAGGCGCGG
CTGGTGCTGG AGAAAACCGC CATCGGCTTT TACCTGTCGG GCCACCTGTT CGACGAGGTG
GAGCAGGAAG TGCGGCAGTT CGCCAAGCGA AGCATTGAAG ACATGAGCGA GTCCCGGGAT
TCTCAACTGC TCGCCGGCAT CGTGACCGAC CTGCGCATCA TCAACGGCAA CCGCGGCAAG
CTGATCATCT TCAAGCTGGA CGACAAGACC GATGTGCTGG AAGTGTCGGT GGACGAGGCG
ACCTTCAACG CCAACCGCAA CCTGCTCAAG GAAGACGAGC TGGTCATTGT CCAAGGCACG
CTGCAGGGCG CATCCGAGCG CTTCGGCCGG CGCTTCAAGA TCACGCAGGT GTGGGATCTG
GAGTCGGCGC GCTGCCGGTT CGGCAAGTAC CTGCGCGTGG CCGTCAACGG CAAGGCGCCG
GATATTTCAA AGCTGGTCAG GGACTTTCCG CCGCGTTCAA GCGAGGCGGC GGACCCGTCC
GAGCCCGTGC GTGGCTTGCC CGTGCGCCTG AGCTTGCGCC GTGAAACCGC GACGGCTGAG
CTGCACCTGG GCGACGCGGC CCGGTTTTTC CCGACCGATG CGGCGCTGGC CAGCTGGATG
GCGCAGGCCG ACAAAGGGCT GGCGCGCATC GTTTATGAGT GA
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| Protein sequence | MKRMFVHLRI HTEFSVVDGT NRIDEIVAAA AADQQPALAI TDLSNLFGTV KFYKEGRKTG
VKPLIGADIW LEAPGKEAGA PASRLLLLVQ DSQGYLNLCE LITRAWTKNV VRDQAVVKLQ
WLQELNEGLI ALSGAQRGAV GQALVQGDSA RAMECALHLS GMFPRRFYLE LQRSGHPEDE
RHVTAAVQLA ARLKLPVVAT HPVQFLTYDD YEAHEARVCI SEGEILGNAR RVRKFTREQY
FKSADQMKAL FADVPSALAN TVEIAKRCSL TLELGKPMLP EFPTPEVNGS RMPPEDYFRH
TSFEGLEERL LHLYPNPAQR DAKRPEYVAR LEFEINTILK MGFPGYFLIV GDFIQWAKNN
GCPVGPGRGS GAGSLVAYAL KITDLDPLRY NLLFERFLNP ERVSMPDFDI DFCQSNRDRV
IDYVKDKYGH AAVSQIVTFG TMAARAAIRD VGRVLDFPYG FCDGISKLIP NKPGQAVTLQ
LVPADRKKND KMVYALEAEP VLADRESKEE DVHTLLDLAR KLEGLTRNVG MHAGGVLIAP
GKLTDFCPLY LQPGSTSAVS QFDKNDVEAI GLVKFDFLGL ATLTILEIAR EFIIARYPAQ
KDFKFEDLPL DDARVYRLFA DGNTEAVFQF ESIGMQRMLK DARPDRLEDL IAMNALYRPG
PMDLIPTYIA RKQGKEVPEY PDPRVKPMLE ETYGIMVYQE QVMQTAQILG GYSLGGADML
RRAMGKKDEK EMAQHREIFR KGAGINGLAQ EKADEVFDLM EKFAGYGFNK SHSAAYALLA
YHTAWLKVHF PAEFFAANMT VEMDDTDKLK ILFGDAQKMG LSFEVPDINQ GDYRFEPITA
KSVRYGLGAI KGTGQQAIAA IVAARKEGGP FTSLFDFCVR VDRSKMNKRT VEALIKGGAF
DSLHLNRAEL LASSERAFDF AAATQANANQ GGLFDMSDSH AASTQEPELV EMPMFGVKAR
LVLEKTAIGF YLSGHLFDEV EQEVRQFAKR SIEDMSESRD SQLLAGIVTD LRIINGNRGK
LIIFKLDDKT DVLEVSVDEA TFNANRNLLK EDELVIVQGT LQGASERFGR RFKITQVWDL
ESARCRFGKY LRVAVNGKAP DISKLVRDFP PRSSEAADPS EPVRGLPVRL SLRRETATAE
LHLGDAARFF PTDAALASWM AQADKGLARI VYE
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