Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2917 |
Symbol | |
ID | 4690001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3072689 |
End bp | 3073795 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639835924 |
Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
Protein accession | YP_983137 |
Protein GI | 121605808 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.205011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCTC TGATTTCCCC TGTTGAAGAC ATCGTGGCCG ACATGCGCGC CGGCCGCATG GTCATTCTGG TTGACGAAGA AGACCGCGAA AACGAAGGCG ACCTGGTGCT GGCCGCCGAC CATGTGACGC CCGAAGCCAT CAACTTCATG GCGCGCTTTG GCCGTGGCCT GATCTGCCTG ACGCTGACGC GCGAGCGCTG CGAACTACTC AAGCTCCCGC CCATGGCGGC GCGCAACGGC GCGCAGTATT CCACCGCCTT CACGGTGTCA ATTGAAGCCG CCGAGGGCGT GACCACCGGC ATTTCAGCGG CCGATCGCTC GCGCACGGTG CAGGCCGCCG TCGCCAGAAA TGCCAAGGTC AGCGACCTGG TGCAGCCCGG CCATATCTTT CCGCTGCAGG CGGTCGATGG CGGCGTCTTG ATGCGCGCCG GCCATACCGA AGCGGGCTGC GACCTGGCAG CAATGGCCGG CTGTTCGCCG GCAGCGGTGA TTTGCGAAAT CATGAACGAC GACGGCACCA TGGCCCGTTT GCAGGACTTG CAGGTGTTTG CGGCCGAGCA TGGCCTGAAA ATCGGCACCA TTGCCGACCT GATCGAACAC CGCAGCCGCA ACGAGTCGCT GCTCGAAAAG ATGGGCAGCC GCACCCTTCA GACCGCTTTT GGCGAATTCA CCGCCCACGC CTTCAAGGAC AAAATCAGCC ACGATCTGCA TCTGGCGCTG GTCAAGGGCG AGTGGACCGC AGACGACACC GTGGCCGTGC GCGTGCACGA GCCGCTGTCG GTGCTGGACC TGCTGGAAAC CGGCCGCACC ATGCACTCAT GGAGCCTGGA CGAAAGCCTC AAGCATATGC AAACCGAAGG CCGTGGCGTG GTGGTGCTGC TGAACTGCGG CGAAAGCGCG GCGCAACTGC TGGCGCAGTT TGAAGGCACG GCCAGGGCCG CCCAGGCGCC CGAGCGCGGC CGCATGGACT TGCGCACCTA CGGCGTGGGC GCGCAGATTC TGCGGGAATG CGGCGTGCAG AAAATGCACC TGATGGGCAA CCCGCGCCGC ATGCCCAGCA TGACCGGCTA TGGCCTTGAG ATCGTCGGCT ACATCGGCAA GAACTGA
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Protein sequence | MTPLISPVED IVADMRAGRM VILVDEEDRE NEGDLVLAAD HVTPEAINFM ARFGRGLICL TLTRERCELL KLPPMAARNG AQYSTAFTVS IEAAEGVTTG ISAADRSRTV QAAVARNAKV SDLVQPGHIF PLQAVDGGVL MRAGHTEAGC DLAAMAGCSP AAVICEIMND DGTMARLQDL QVFAAEHGLK IGTIADLIEH RSRNESLLEK MGSRTLQTAF GEFTAHAFKD KISHDLHLAL VKGEWTADDT VAVRVHEPLS VLDLLETGRT MHSWSLDESL KHMQTEGRGV VVLLNCGESA AQLLAQFEGT ARAAQAPERG RMDLRTYGVG AQILRECGVQ KMHLMGNPRR MPSMTGYGLE IVGYIGKN
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