| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2914 |
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| Symbol | |
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| ID | 4686463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3070371 |
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| End bp | 3070805 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639835921 |
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| Product | type IV pilin PilE |
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| Protein accession | YP_983134 |
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| Protein GI | 121605805 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0462503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATACG ACAAAGAATA TACCCGTTAC GTCGCTGGCT TCACCTTGAT AGAGGTGATG
ATTACAGTAG CTATCATTGG CATATTGGCT TCGATTGCCT TGCCGTCATA TCAAGAATAC
ATTCGGCGAA GCCACCGGGC CAATGCGCGC AATACCCTGA TTCAGGCTAT GCAGTGGATG
GAGCGTGCAG CGACTTCCAC GGGAGCCTAC CCGACGGGTG CCAACATACC CGATGGCATT
AAGGTCGTGG AAGGCGGAAG ATACGCCAAC GTGTCGGTAA CCAATTCAAC AACCAGCACT
TACACATTTA CGGCTGCTCC AGCAGGCGCG CAAATCTCAG ACAAATGCGG CTCTTTCATA
ATTGATCAAG CGAATCGACG TACCGTGAGT GTGAGCACGG ATGCTACGTT TGCTGCTGAT
TGCTGGGGAC GCTGA
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| Protein sequence | MEYDKEYTRY VAGFTLIEVM ITVAIIGILA SIALPSYQEY IRRSHRANAR NTLIQAMQWM
ERAATSTGAY PTGANIPDGI KVVEGGRYAN VSVTNSTTST YTFTAAPAGA QISDKCGSFI
IDQANRRTVS VSTDATFAAD CWGR
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