Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2894 |
Symbol | |
ID | 4686315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3045614 |
End bp | 3046180 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639835901 |
Product | TPR repeat-containing protein |
Protein accession | YP_983114 |
Protein GI | 121605785 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0171809 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACGC GAGCCTTCTT TTCACGCAAG CCCCCAGCCT TCGCGCTCGG CAGCTGGCTG CTGCTGGCCC TGCTAGTCGC GCCGGCCGCG CAGGCTGACG AGTACACCGA TGTCAACCGC CTGATCAGCA GCAAGCAGTT CCCCCAGGCC CTGGCCAGCG CCGACAAATA CCTGGCCGCC AAGCCGCGCG ACCCGCAGAT GCGCTTCCTC AAGGGCGTGA TCCAGACCGA AACCGCCAAG ACCGGCGAAG CCATCGCCAC CTTCACCCAG ATCACCGCCG ACTACCCCGA ACTGCCCGAG CCCTACAACA ACCTGGCCGT GCTGTATGCC AGCCAGAGCC AGTTCGACAA GGCCCGCGAA ACCCTTGAAA TGGCGGTGCG CCTGAACCCG CGCTACGCCA CCGCCCACGA AAACCTGGGC GACATCTATG CCCGCCTGGC CAGCCAGTCC TACAGCCGGG CGCAGCAGCT CAATGCCGGC AACGCCGGCC TTAGCCCTAA GCTGGCGCTG ATCAGCCAGC TGCTGGCGCC CGCCGCCAAG GCAGCCACGC CGGCCAAGGC GCCCTGA
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Protein sequence | MPTRAFFSRK PPAFALGSWL LLALLVAPAA QADEYTDVNR LISSKQFPQA LASADKYLAA KPRDPQMRFL KGVIQTETAK TGEAIATFTQ ITADYPELPE PYNNLAVLYA SQSQFDKARE TLEMAVRLNP RYATAHENLG DIYARLASQS YSRAQQLNAG NAGLSPKLAL ISQLLAPAAK AATPAKAP
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