| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2893 |
|---|
| Symbol | cysS |
|---|
| ID | 4686267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3043914 |
|---|
| End bp | 3045305 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639835900 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_983113 |
|---|
| Protein GI | 121605784 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.751187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0110862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTC GTATTTACAA CACGCTGTCG CGTGCCGTAG AGGATTTTTC TCCCCTTGTT
CCCGGCCAGG TCCGCATGTA TGTGTGCGGC ATGACCATTT ATGACCTTTG CCACATCGGC
CATGCGCGCA TGATGATGGC TTTCGATGTG GTGCAGCGCT GGCTCAAGGC CAGCGGCTAC
GAGGTCAGGT ATGTGCGCAA CATCACCGAC ATCGACGACA AGATTATCAA GCGCGCGGTC
GAGCGCGGCA TCACCATCCG CGCGCTGACC GACGAGATGA TCGCGGCCAT GCACCAGGAC
ATCGGCGCGC TGGGCATCGA GCCGCCGACG CTGGAGCCGC GCGCGACCGA ATACGTGCCG
CAGATGCTGG CGATGATCGG CAAGCTCGAA GAAAAAGGGC TGGCCTACCG GGGCTCTAGC
GGCGACATGA ACTACGCCGT GCGCAAGTTC CCGGGTTACG GCAAGCTGTC GGGCAAGTCG
CTCGACGAGT TGCGCGCCGG CGAGCGCGTC GCCGTGCTCG AAGGCAAGGA CGACCCGCTG
GACTTCGTGC TGTGGAAGTC GGCCAAGGAG AGCGAGCCCG AGGACGCCAA GTGGGACAGC
GCGGCGCTGG GCCACGACTA CGGCAAGGGC CGGCCCGGCT GGCACATCGA ATGCTCGGCC
ATGAGCTGCC AGACGCTGGG CGAGACCTTC GACATCCACG GCGGCGGGGC CGACCTGCAG
TTTCCGCACC ACGAAAACGA GATTGCCCAG AGCGAAGGCG CCAACGGCAA GCCGCTGGCG
CGATTCTGGG TGCACAACGG CTTCGTGCGC GTGGACAACG AGAAGATGTC CAAGTCGCTG
GGCAACTTCT TCACCATCCG CGACGTGCTG CAAAAGTACG ACGCCGAAAC CATCCGGTTT
TTCATCATCC GCGCGCACTA CCGCAGCGCG CTGAACTACA GCGATGCGCA CCTCGACGAT
GCGCGCAATT CGCTCAAGCG CCTGTACACG GCGCTGGCTC TGGTTGCGCC GGCCACCGTG
GAAATCGACT GGGCCGACCC GTTCGCAGCC CGCTTCAAGG CCGCGATGGA CGAGGACTTC
GGCACGCCCG AAGCCATTGC CGTGCTGTTC GAGCTGGCCG GCGAGGTCAA CAAGACGCAT
TCCGCCGAAC GCGCCGGACT GCTGAAAAGC CTGGGCGCCT GCCTGGGCCT GCTGCAGGGC
GAGCCTTCGG CTTATCTGCA GGCGGGTGCG GGGCTGGACG ATGCAGCCAT CCAGGCATTG
ATCACGCAGC GCGCCGACGC CAAGAAGGCC AGGGACTTTG CGGCGGCAGA CCGAATCCGC
ACCGAACTGC TGGGCCAAGG CATCGTGCTC AAAGACTCGC CTCTGGGAAC GACCTGGGAG
GTGCAGTCGT GA
|
|---|
| Protein sequence | MSLRIYNTLS RAVEDFSPLV PGQVRMYVCG MTIYDLCHIG HARMMMAFDV VQRWLKASGY
EVRYVRNITD IDDKIIKRAV ERGITIRALT DEMIAAMHQD IGALGIEPPT LEPRATEYVP
QMLAMIGKLE EKGLAYRGSS GDMNYAVRKF PGYGKLSGKS LDELRAGERV AVLEGKDDPL
DFVLWKSAKE SEPEDAKWDS AALGHDYGKG RPGWHIECSA MSCQTLGETF DIHGGGADLQ
FPHHENEIAQ SEGANGKPLA RFWVHNGFVR VDNEKMSKSL GNFFTIRDVL QKYDAETIRF
FIIRAHYRSA LNYSDAHLDD ARNSLKRLYT ALALVAPATV EIDWADPFAA RFKAAMDEDF
GTPEAIAVLF ELAGEVNKTH SAERAGLLKS LGACLGLLQG EPSAYLQAGA GLDDAAIQAL
ITQRADAKKA RDFAAADRIR TELLGQGIVL KDSPLGTTWE VQS
|
|---|
| |