| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2883 |
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| Symbol | |
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| ID | 4686690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3030185 |
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| End bp | 3031735 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639835889 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
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| Protein accession | YP_983103 |
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| Protein GI | 121605774 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.234305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA TCAAACAAGC CGACCTCATC GAATCCGTTG CCGCTGCTTT GCAGTACATC
AGCTACTACC ACCCGGCCGA CTACATCGCC CACCTGGCGC GCGCCTACGA GCGCGAGCAA
AGCCCGGCCG CCAAGGACGC GATTGCGCAA ATCCTGACCA ACAGCAAGAT GAGCGCGACC
GGCCACCGTC CGATCTGCCA GGACACCGGC ATCGTCAACG TGTTTTTGAA AGTCGGCATG
GACGTTCGCT GGGAAGGCTT CACCGGCAGC CTCGACGACG CCATCAACGA AGGCGTTCGG
CAAGGCTACA ACCACCCCGA CAACACGCTG CGCGCCAGCG TCGTGGCCGA TCCGCAATTC
GACCGCAAGA ACACCAAGGA CAACACGCCA GCGGTGATCT TCACCGAAAT CGTTCCGGGC
AACACGGTCG AAGTCACCGT CGCGGCCAAG GGCGGCGGCT CCGAAAACAA GAGCAAGATG
GTCATGCTGA ATCCCGGCGA CTCGGTGGTC GATTGGGTCT TGAAAACCGT TCCCACGATG
GGCGCAGGCT GGTGCCCGCC CGGCATGCTG GGCATCGGCA TCGGCGGCAC CGCTGAAAAA
GCCGTGCTGA TGGCCAAGGA AAGCCTGATG GACGACCTGG ACATGTACGA ACTGCAGGCC
AAATCGGCTT CCGGCGAAGC GCTGACCAAG GTCGAGGCCC TGCGACTGGA ACTGTTTGAA
AAGGTCAACG CGCTGGGCAT AGGCGCGCAG GGCCTGGGCG GCCTGACCAC CGTGCTCGAC
ATCAAGATCA AGATGTATCC AACGCACGCG GCCAGCAAGC CAGTCGCCAT GATCCCGAAC
TGCGCCGCCA CGCGCCACGC GCATTTCGTC ATGGACGGCA GCGGCCCCGT CTATCTGACG
CCGCCGTCGC TCGACACTTG GCCCGATGTG GACTGGAAGC CTGACTACGT TAAGAGCAAG
AAGGTCGATC TGAACACGCT GACGAAGGAA GAAGTCGCCA GCTGGACCCC CGGCCAGACC
TTGCTGCTCA ACGGCAAGAT GCTGACCGGC CGCGACGCCG CGCACAAGCG CATTGCTGAC
ATGCTGGCCA AGGGTGAAAA GCTGCCGGTC GATTTCACCA ACCGCGTGAT TTACTACGTC
GGCCCGGTCG ATCCGGTCAA GGGCGAAGCG GTCGGCCCCG CCGGCCCGAC CACGGCGACC
CGCATGGACG GCTTCACCGA AATGATGCTG GCGCAGACCG GCCTGATCTC GATGGTCGGC
AAGGCCGAGC GCGGCCCGGT GGCGATTGCG GCGATCAAGA AGCACCAGAG CGCTTATTTG
ATGGCTGTCG GCGGCGCCGC TTATTTGGTG TCCAAGGCCA TCAAGCACGC CGAAGTCGTC
GGGTTTGCCG ACCTGGGCAT GGAAGCGATC TATGAGTTCG ACGTGGTCGA TATGCCCGTG
ACCGTGGCGG TCGATTCGGG CGGCACCAGC GCCCACATCA CCGGCCCGGC CCTGTGGCAG
GAACGCATTG CCACCGGCGA ATTCAAGAAC ATCGCCGTGA CCAACGCCTG A
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| Protein sequence | MTTIKQADLI ESVAAALQYI SYYHPADYIA HLARAYEREQ SPAAKDAIAQ ILTNSKMSAT
GHRPICQDTG IVNVFLKVGM DVRWEGFTGS LDDAINEGVR QGYNHPDNTL RASVVADPQF
DRKNTKDNTP AVIFTEIVPG NTVEVTVAAK GGGSENKSKM VMLNPGDSVV DWVLKTVPTM
GAGWCPPGML GIGIGGTAEK AVLMAKESLM DDLDMYELQA KSASGEALTK VEALRLELFE
KVNALGIGAQ GLGGLTTVLD IKIKMYPTHA ASKPVAMIPN CAATRHAHFV MDGSGPVYLT
PPSLDTWPDV DWKPDYVKSK KVDLNTLTKE EVASWTPGQT LLLNGKMLTG RDAAHKRIAD
MLAKGEKLPV DFTNRVIYYV GPVDPVKGEA VGPAGPTTAT RMDGFTEMML AQTGLISMVG
KAERGPVAIA AIKKHQSAYL MAVGGAAYLV SKAIKHAEVV GFADLGMEAI YEFDVVDMPV
TVAVDSGGTS AHITGPALWQ ERIATGEFKN IAVTNA
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