Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2882 |
Symbol | fumC |
ID | 4686683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3028690 |
End bp | 3030081 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639835888 |
Product | fumarate hydratase |
Protein accession | YP_983102 |
Protein GI | 121605773 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.405622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.452741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACAC CCCACGCCAC GCGCACTGAG CGCGACACTT TCGGCCCCAT CGAAGTACCG GCTGAGCGGC TCTGGGGCGC GCAAACCCAG CGTTCGCTGC AGAACTTCGA TATTTCAGGC GAGCGCCAGC CGGTCGAGCT GATCCGGGCG CTGGCGCAGA TCAAGCGCTC CTCGGCGCTC GTCAACCATG CGCTGGGCCT GCAGGATGAT CAAAAAACCA GCGCCATCGT GGCGGCGGCC GATGAAGTCA TTGCCGGCCG GCATCCGGAC GAATTCCCGC TGGTGGTCTG GCAGACCGGC TCGGGCACGC AGACCAACAT GAACGTCAAT GAAGTACTGG CGAACCGCGC CAGCGAATTG CTGGGCGGCG AGCGCGGCGA TGCGCGCCTT GTCCATCCGA ATGACGACGT GAACCGCAGC CAGTCGTCGA ACGATGTGTT TCCGACCGCC ATGCATGTGT CGGCGGTCGA TGGCATGACG AACAGGCTGC TGCCGGCGAT TGAAAAACTG CGCGCCACGC TGGCGCAGAA ATCGCGCGAC TTTGACGGCA TCGTGAAAAT CGGCCGTACC CACCTGCAGG ACGCGACGCC GCTGACGCTG GGCCAGGAGT TTTCGGGCTA CGTGGCGCAA CTGGCGCACG GCGAGGCGCA TGTGCGCGCC GCGCTGCCGC ACTTGTATGA ACTGGCGCTG GGCGGCACCG CCGTGGGAAC CGGGCTGAAT GCGCCGAAAG GCTATGCCGA ACAGGTCGCG GCCGAACTGG CGCGGCTGAC CGGCTTGCCC TTCGTCACGG CGCCGAACAA GTTCGAGGCC ATGGCTTCGT GCGACGCGCT GGTCCACGCC CACGGCGCGC TGAAGACGCT GGCCGCCAGC TTGATGAAGA TTGCCAACGA TGTGCGCTGG CTGGCCAGCG GTCCGCGCAG CGGCATCGGC GAGTTGAGCA TTCCCGAGAA CGAGCCGGGT TCGTCGATCA TGCCGGGCAA GGTCAACCCG ACGCAAAGCG AGGCGCTGAC GATGCTGGCC GCGCAGGTGT TCGGCAACGA TGTGGCGATC AATTTCGGCG GCGCGTCGGG TAACTTCGAA CTCAATGTGT TCCGGCCGAT GATTGCCTGG AATTTTTTGC AAAGCGTGCG CCTGCTGGCC GACGGCATGG TGAGCTTCAA TGACCACTGC GCCGTCGGCA TAGCACCCAA CCGCGAGCGC ATCGCCGAAC TGGTCGGCCG TTCATTGATG CTGGTGACGG CGCTGAACCC GCACATCGGC TACGACAAGG CGGCCTTCAT CGCCAAGAAG GCGCACAAGG AAGGCAGCAG CCTGCGCGAG GCGGCGATTG CCTCGGGCCA TGTCACGGCC GAACAGTTCG ATGCCTGGGT GGTGCCGCAG AACATGGTGT GA
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Protein sequence | MITPHATRTE RDTFGPIEVP AERLWGAQTQ RSLQNFDISG ERQPVELIRA LAQIKRSSAL VNHALGLQDD QKTSAIVAAA DEVIAGRHPD EFPLVVWQTG SGTQTNMNVN EVLANRASEL LGGERGDARL VHPNDDVNRS QSSNDVFPTA MHVSAVDGMT NRLLPAIEKL RATLAQKSRD FDGIVKIGRT HLQDATPLTL GQEFSGYVAQ LAHGEAHVRA ALPHLYELAL GGTAVGTGLN APKGYAEQVA AELARLTGLP FVTAPNKFEA MASCDALVHA HGALKTLAAS LMKIANDVRW LASGPRSGIG ELSIPENEPG SSIMPGKVNP TQSEALTMLA AQVFGNDVAI NFGGASGNFE LNVFRPMIAW NFLQSVRLLA DGMVSFNDHC AVGIAPNRER IAELVGRSLM LVTALNPHIG YDKAAFIAKK AHKEGSSLRE AAIASGHVTA EQFDAWVVPQ NMV
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