| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2872 |
|---|
| Symbol | |
|---|
| ID | 4686739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3014719 |
|---|
| End bp | 3015723 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639835878 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_983092 |
|---|
| Protein GI | 121605763 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.446965 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGA TGGCATTTGA GGTTGAAACC AGCGGCACCC GCCGCAGCGT GTTGCGCGCC
GCAGCCGCCG GCATGGCGGC GCTGTCGTTC GGCAGCCACG CCCAGCCGGC CTGGCCCGCC
AAGCCGGTCA CGGTGATCGT GCCGTTTCCG GCCGGCGGCG GCACCGATGC CTTTGCCCGT
CCGCTGTCGG CGCAGTTTGC CAAGCTGACC GGCAAGCAGC TCATCATCGA CAACCGGGGC
GGCGCGGGCG GCACGCTGGG CGCGAGCATC GCGGCCCGGG CGCAGCCCGA CGGCTACACG
CTGTTCATGG GCGCCGTGCA CCATGCGATC GCGCCTTCGA TGTACCCGAA GCTCGACTAC
GACATTGAAA AAGACTTCGT GCCGCTGGCG CTGGTGGCCA ATGTGCCGCA GGTGCTGGTC
GTCAACCCGA AGAACATGCC CGGCGATTTC AAGGCCTTCC TGGCGCAGGT GCGCGCCAAG
CCGGCCGGCT TCAACTACGG CTCGGCCGGC GCGGGTACGT CGCACCACCT GGCCGGCGAG
CTGTTCAAGC AGCAGACCAA AACCTTTATC ACCCACATTC CCTACCGGGG CGCGGGGCCG
GCGCTGCAGG ACCTGATCTC GGGCAATGTG GACATGATGT TCGACGGGCT GGGTTCGTCG
GCAGGGCACA TCAAGGGCGG CCGCATCAAG GCGCTGATGG TCTCGGGCGG CAAGCGCAGT
CCGGCTTTTC CGGACGTGCC CTGCGCCGCC GAACTGGGCC TGCCCGACTA CACCGTGACC
ACCTGGTACG GCCTGTGGGC GCCCAAGGGA ACGCCGGCCG ATGTGCAGGC GCGCATCGTG
GAAGAGCTGC GCAAGGCCGC TGCCACCGAT GAGCTGAAAG CCATCTGGGC CAGCAACGGC
GCCGAGTTCG GCAACCTGAC GCCGGCGCAG TTCGGCAGCT TTGTCAGCGC CGAGGTCAGG
CGCTGGGCGG CTGTCGTCAA GGCCTCTGGC GCCAAACTTG ATTAA
|
|---|
| Protein sequence | MALMAFEVET SGTRRSVLRA AAAGMAALSF GSHAQPAWPA KPVTVIVPFP AGGGTDAFAR
PLSAQFAKLT GKQLIIDNRG GAGGTLGASI AARAQPDGYT LFMGAVHHAI APSMYPKLDY
DIEKDFVPLA LVANVPQVLV VNPKNMPGDF KAFLAQVRAK PAGFNYGSAG AGTSHHLAGE
LFKQQTKTFI THIPYRGAGP ALQDLISGNV DMMFDGLGSS AGHIKGGRIK ALMVSGGKRS
PAFPDVPCAA ELGLPDYTVT TWYGLWAPKG TPADVQARIV EELRKAAATD ELKAIWASNG
AEFGNLTPAQ FGSFVSAEVR RWAAVVKASG AKLD
|
|---|
| |