Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2855 |
Symbol | |
ID | 4686923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2997030 |
End bp | 2998349 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639835863 |
Product | isocitrate lyase |
Protein accession | YP_983077 |
Protein GI | 121605748 |
COG category | [C] Energy production and conversion |
COG ID | [COG2224] Isocitrate lyase |
TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0489134 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACAAA GCCTCACAGA ACAACTCAGC CGCGAACAGC AAGCTGCCGC TCTGCAAAAA GACTGGGATA CCAACCCCCG CTGGAAGGGT ATCAAACGCG GTTACACCGC AGCCGAAGTT GTGCGTCTGC GCGGCTCGTT CCCCATTGAG CACACGCTGG CCCGTCGCGG TGCTGAAAAG CTCTGGGATT TGCTGCACAC CGAGGCGTAT GTCAACTGCC TGGGTGCTTT GACCGGTGGT CAAGCCATGC AGCAGGTCAA GGCCGGCGTG AAGGCAATTT ACCTGTCGGG CTGGCAAGTC GCCGCCGACA ACAACGGCTA CGCCGCCATG TACCCTGACC AGTCGCTGTA CCCCGTGGAT TCGGTGCCAA AAGTGGTCGA GCGCATCAAC AACACCTTCC GCCGTGCCGA TGAAATCCAG CACTCCAAGG GCATTGACGC CGGCGATGCA GGCTACATCG ACAACTTCGC GCCCATCGTG GCCGATGCCG AAGCCGGTTT TGGCGGCGTG CTGAACGCGT TTGAACTGAT GAAGGCCATG ATCAATTCCG GTGCGGCCGG CGTGCATTGG GAAGACCAGC TGGCCTCCGT CAAGAAGTGC GGCCACATGG GCGGCAAAGT TCTGGTGCCT ACCGCCGAAG CCTGCCAAAA GCTGATCGCC GCCCGCATGG CTGCCGACGT TTGCGGCGTG CCTACCCTGG TGATTGCCCG TACCGACGCT GAAGCCGCCG ACTTGCTGAC CAGCGACTAC GACGAAAACG ACAAGCCATT CCTGACTGGC GAGCGTACCG CCGAAGGCTT CTACAAGACC AACAAGGGCA TGGACCAGGC TATCAGCCGC GCCATCGCTT ATGCTGAGTA CGCTGACTTG GTGTGGTGCG AAACCGGCAC GCCTGACCTC GAATTTGCAA AGAAATTCGC CGATGCCGTG CATGCGGTCC ACCCCGGCAA GATGCTGGCT TACAACTGCT CGCCATCGTT CAACTGGAAG AAAAACCTGG ACGACGCCAC CATCGCCAAG TTCCAGAAAG AACTCGGCGC CATGGGTTAC AAGTACCAGT TCATCACGCT GGCCGGCATC CACTCCATGT GGTACAACAT GTTCGACTTG GCCCAGGACT ACGTCGCGCG CGGCATGTCG GCTTACGTCG AGAAGGTGCA GGAGCCCGAA TTCGCAGCCC GCGACCGTGG CTACACTTTT GTGTCCCACC AGCAGGAAGT CGGCACCGGC TACTTCGACG AAGTGACCAC CGTGATCCAG GGCGGCAAGT CCAGCGTGAC CGCGCTGACC GGCTCGACCG AAGAAGAGCA GTTCCACTGA
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Protein sequence | MPQSLTEQLS REQQAAALQK DWDTNPRWKG IKRGYTAAEV VRLRGSFPIE HTLARRGAEK LWDLLHTEAY VNCLGALTGG QAMQQVKAGV KAIYLSGWQV AADNNGYAAM YPDQSLYPVD SVPKVVERIN NTFRRADEIQ HSKGIDAGDA GYIDNFAPIV ADAEAGFGGV LNAFELMKAM INSGAAGVHW EDQLASVKKC GHMGGKVLVP TAEACQKLIA ARMAADVCGV PTLVIARTDA EAADLLTSDY DENDKPFLTG ERTAEGFYKT NKGMDQAISR AIAYAEYADL VWCETGTPDL EFAKKFADAV HAVHPGKMLA YNCSPSFNWK KNLDDATIAK FQKELGAMGY KYQFITLAGI HSMWYNMFDL AQDYVARGMS AYVEKVQEPE FAARDRGYTF VSHQQEVGTG YFDEVTTVIQ GGKSSVTALT GSTEEEQFH
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