Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2854 |
Symbol | thrS |
ID | 4687071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2995021 |
End bp | 2996928 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639835862 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_983076 |
Protein GI | 121605747 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0336987 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCAAA TCACGCTTCC TGACAGTTCC AAACGCGATT ATTCTGGCCC AGTGACGGTG GCGGAGGTGG CTGCGTCCAT TGGCACCGGC CTGGCCAAGG CGGCTCTTGG CGGCAAGGTC GATGGAAAGC TGGTTGATAC CAGCTTTCTC ATCAGCCAAG ACAGCGCGCT GTCCATCGTC ACCGCCAAGG ATGCGGAAGG CCTGGAGTTG ATTCGCCACA GCGCTGCCCA CTTGCTGGCT TACGCGGTCA AGGAGCTGTT TCCCGAGGCG CAGGTGACCA TCGGGCCGGT GATTGAAAAC GGGTTTTTCT ACGATTTTTC CTACAAGCGG CCATTCACGC CAGAAGACTT GGTCGCCATC GAAAAGCGCA TGGCCGAACT GGTCGCCAAG GATGAACCCG TCACGCGCCG GGTCTTGCCG CGCGATGAGG CCGTAGCCTA TTTCAAGAGC CTGGGTGAAT ATTACAAGGC CGAGATCATC GCCAGTATTC CGGCCAACGA AGATGTTTCG CTGTACCGCG AAGGCAAGTT TGAGGATTTG TGCCGCGGCC CGCATGTGCC CAGCACCGGC AAGCTGAAAT TCTTCAAGCT CATGAAAGTG GCCGGCGCCT ATTGGCGAGG CGACCATCAC AACGAGATGC TACAACGCAT CTACGGCACG GCCTGGGCCA CGAAAGACGA GCTGCAGCAG TACCTGACGA TGCTCGAAGA GGCGGACAAG CGCGATCACC GCAAGCTGGG CAAGGAACTG GACCTGTTCC ATATTGATGA CCATTCGCCG GGACTGGTGT TCTGGCATCC CAAGGGCTGG ACGGTCTGGC AGGGCGTCGA GCAGTACATG CGCAAGGTCT ATCAAAACAA TGGCTACCAG GAAGTCAAGG GTCCGCAACT GCTGGACAAG ACGCTGTGGG AAAAAACCGG TCACTGGGAC AAGTACCGCG ACAACATGTT CACCACCGAG AGCGAAAAGC GTGATTTTGC GCTCAAGCCG ATGAACTGTC CGGGTCACAT CCTGATTTTC AAGCAGGGCA TCAAGAGCTA CCGCGACTTG CCGCTGCGTT ACGGCGAGTT TGGCCAATGC CATCGCAACG AGCCGACGGG CGGCCTGCAC GGCATCATGC GCGTGCGTGG TTTTACCCAG GATGATGGGC ACATTTTCTG CACCGAAGAG CAGATTTTGA AAGAGTGCGT TGACTACACA ACGCTGCTAC AAAAGGTCTA TACCGATTTT GGCTTCAAAA ACATCATCTA CAAGGTCGCC ACCCGCCCTG AAGCCCGCAT CGGCTCCGAC GAAAGCTGGG ACAAAGCCGA ACACGCGCTG ATCGAAAGCC TGCGCGCTTC AGGTTGCGAA TTCGAAATTT CCCCGGGCGA GGGCGCGTTT TACGGTCCGA AGATTGAATA CACGCTGAAA GATGCGATTG GCCGGCAGTG GCAGTGCGGC ACGATTCAGG TCGATTTCTC GATGCCTGAG CGGCTGGATG CTGAATATGT CGGCGAGGAC GGCGCACGCC ATCGCCCGGT CATGCTGCAC CGCGCCATTG TCGGCAGCCT GGAGCGATTC ATCGGAATTT TGATCGAGGA ACATGCCGGC GCATTGCCCA CTTGGCTCGC GCCAGAGCAG GTTTCCGTGC TCACAATCAC CGATTCGCAG GCCGAATACG CTCGGGGAGT TGCTAAAACG CTGCAGAATC AAGGGCTTAG GGTTAATCTT GACCTGCGCA ATGAGAAAAT TACGTATAAA ATACGCGAGC ACTCGTTGCA AAAGCTGCCT TTTATCCTTG TTGTAGGTGA CAAGGAAATG GCTGCAGGCG CAGTTTCAGT GCGTGCCCGG GGTAACAAAG ACCTTGGCGT AATGTCCCTC GAAGCGTTTG CCGAACGAAT TGCTTCGGAC ATTGCACAAA AAGCCTGA
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Protein sequence | MIQITLPDSS KRDYSGPVTV AEVAASIGTG LAKAALGGKV DGKLVDTSFL ISQDSALSIV TAKDAEGLEL IRHSAAHLLA YAVKELFPEA QVTIGPVIEN GFFYDFSYKR PFTPEDLVAI EKRMAELVAK DEPVTRRVLP RDEAVAYFKS LGEYYKAEII ASIPANEDVS LYREGKFEDL CRGPHVPSTG KLKFFKLMKV AGAYWRGDHH NEMLQRIYGT AWATKDELQQ YLTMLEEADK RDHRKLGKEL DLFHIDDHSP GLVFWHPKGW TVWQGVEQYM RKVYQNNGYQ EVKGPQLLDK TLWEKTGHWD KYRDNMFTTE SEKRDFALKP MNCPGHILIF KQGIKSYRDL PLRYGEFGQC HRNEPTGGLH GIMRVRGFTQ DDGHIFCTEE QILKECVDYT TLLQKVYTDF GFKNIIYKVA TRPEARIGSD ESWDKAEHAL IESLRASGCE FEISPGEGAF YGPKIEYTLK DAIGRQWQCG TIQVDFSMPE RLDAEYVGED GARHRPVMLH RAIVGSLERF IGILIEEHAG ALPTWLAPEQ VSVLTITDSQ AEYARGVAKT LQNQGLRVNL DLRNEKITYK IREHSLQKLP FILVVGDKEM AAGAVSVRAR GNKDLGVMSL EAFAERIASD IAQKA
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