Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2836 |
Symbol | |
ID | 4686947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2979461 |
End bp | 2980654 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639835844 |
Product | hypothetical protein |
Protein accession | YP_983059 |
Protein GI | 121605730 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00251794 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCAGCC TGGCCGGGCG CGACATTGCC CACAGCTGGG GCAAGTTTGT GCTGACCGGC CTGGGTCTGG GCCTGCTGAT TGGGGTGACG CTGACCATGG CCGGCGTCTA CCGCGGCATG GTTGATGACG CGCAGGCGCT GCTCACCAAC AGCCGGGCCG ACTTGTGGGT GGTGCAAAAG GACACGCAGG GGCCGTATGC CGAATCGTCG AGCCTGAAGG ACGACGTGGT GCGCAGCGTG CGCGGCATGC CGGGCGTGGC GCAGGCGGCC AACGTGACCT ACTTCACGAT GCAGGTGAGC AACGACGACG CCAGCGAAAC GCGCGCCATG GTGGTCGGCA TCGAGCCCGA TGGACCGGGA GCGCCGGGCT ACCTGGTGGC GGGCCGGCAA CTCACGCGTA GCCATTACGA GGCCGTGGCC GACATCAAGG CCGGCTTTGT CCTGGGCCAG CGCATCCGCA TTCGCCGCCA CGACTACCGC GTGGTCGGGC TGACGCAGCG CATGGTGTCC TCGGGCGGCG ACCCGATGGT CTTCATTGCG CTGAAAGACG CGCAGGAAGC ACAGTTTTTG AAAGACAACG ATGCCATCGT CAACGACCGT ACCCGAACTG CTAATAACCC GGCCTTCAAC CGCCCAGGCG TGCCCGGCCT GCTGGACGCG GTGCAGGCGC TGCAAACCAG CAGCCGCAAC GTCAACGCGG TGCTGGTGCA GCTGGCGCCC GGCTTCGAGG CCGAACAGGT GGCCGAGCCG ATTCGCCGCT GGAAGCACCT GGCGGTGTTC ACGCGCGCGG GCATGGAAGA CATCCTGGTG GCCAAGCTGA TCGCCACCTC GGCCAGGCAG ATCGGCATGT TCCTGGCGAT CCTGGCGGTG GTCAGCGCCG CCATCGTGGC CTTCATCATC TACACCATGA CACTGGGCAA GATCCGCGAA ATTGCCGTAC TCAAGCTGAT TGGCACGCGC AACCGCACCA TTGCCGGCAT GATCTTGCAG CAGGCCCTTA GCCTGGGGCT GATAGGTTTT GTGGTTGGCA AGGTGGCGGC CACGGTCTGG GCGCCCATCT TCCCGAAATT CGTGCTGCTG CTGACGCAGG ACGCGCTCAT CGGCCTGGCC GCCACGCTGC TGATCTGCGC GCTGGCCAGC ACGCTGGCGA TTCGCGCCGC GCTCCAGGTC GATCCGGCCA CCGCCATCGG ATGA
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Protein sequence | MISLAGRDIA HSWGKFVLTG LGLGLLIGVT LTMAGVYRGM VDDAQALLTN SRADLWVVQK DTQGPYAESS SLKDDVVRSV RGMPGVAQAA NVTYFTMQVS NDDASETRAM VVGIEPDGPG APGYLVAGRQ LTRSHYEAVA DIKAGFVLGQ RIRIRRHDYR VVGLTQRMVS SGGDPMVFIA LKDAQEAQFL KDNDAIVNDR TRTANNPAFN RPGVPGLLDA VQALQTSSRN VNAVLVQLAP GFEAEQVAEP IRRWKHLAVF TRAGMEDILV AKLIATSARQ IGMFLAILAV VSAAIVAFII YTMTLGKIRE IAVLKLIGTR NRTIAGMILQ QALSLGLIGF VVGKVAATVW APIFPKFVLL LTQDALIGLA ATLLICALAS TLAIRAALQV DPATAIG
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