Gene Pnap_2797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2797 
Symbol 
ID4687701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2943607 
End bp2943921 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content57% 
IMG OID639835805 
Productintegration host factor, beta subunit 
Protein accessionYP_983020 
Protein GI121605691 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.903901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000129709 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCGAA GCGATTTAGT TGAAGAGTTG GCTGCCCGAT TCAGCCAGTT GACACACCGC 
GATGCCGAAC ATGCCGTCAA GACGCTTCTT GATGCCATGA GCGACACGCT GGTGCGTGGC
AACCGGATCG AAATCAGGGG TTTTGGCAGC TTCTCCATCA ACCGGCGGCC GCCCCGCATG
GGACGCAATC CCCGGTCTGG AGAAAGCGTA GCCATTCCTG AAAAACGGGT GCCTCATTTC
AAGCCGGGCA AGGCATTGCG GGAAGCCGTT GATGCCCGAA CCGGCGAATT GCTGAAGGTC
ACATATTCCG GATAA
 
Protein sequence
MTRSDLVEEL AARFSQLTHR DAEHAVKTLL DAMSDTLVRG NRIEIRGFGS FSINRRPPRM 
GRNPRSGESV AIPEKRVPHF KPGKALREAV DARTGELLKV TYSG