| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2767 |
|---|
| Symbol | |
|---|
| ID | 4687915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 2910657 |
|---|
| End bp | 2912042 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639835775 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_982990 |
|---|
| Protein GI | 121605661 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0847094 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATT TGCAAGCCAC GCAGATCAAG GCGCTCAAGG CGGGGATTCA GGGGGAGGTC
ATTCTTCCCG AGGATGCTTC CTTTGACACC GCGCGCCAGG TCTGGAACGC GATGATCGAC
AAGCACCCCG CCGCCATCGT CCGATGCGCC GCCACCCCGG ATGTGGTTCA CGCGGTGAAT
TTTGCCCGGG AGCAAGGCCT GCGGCTGGCC GTGCGCGGCG GCGGGCACAA CATCGCCGGC
AGCGCGGTGT GCGACGACGG CATCGTCATC GACCTCTCGC AGATGAAGGC CGCCTACATT
GATACCAGCA ACCGCCGCGC CAGCATTGAA GGCGGCGCCA CGCTGGCCGA TTTCGACGCC
GCCGCCCAGG TACACGGCCT GGCCGTACCG CTGGGCATCA ACTCCACCAC CGGCGTCGCC
GGCCTGACGC TGGGCGCCGG CTTTGGCTGG CTCAGCCGCA AGTACGGCAT GACCATCGAC
AGCCTGGAAT CGGCCGAAGT GGTGACGGCG GCCGGCGAGG TGCTGCGCGC CAGCGCCACC
GAGCACCCCG ACCTGTTCTG GGCATTGCGC GGCGGCAGCG GCAATTTCGG CGTCGTGACG
CGCTTCGGTT TCCGGCTCCA TCCGGTCGGC CCGAATGTGC TCGCCGGCCT GATCGTCTAT
CCGTTTGCCG AGGCCAAGAC GGTGCTTCAG CAGTACCGCG AATTCACGGA CCAGGCGCCC
GATGAGCTTT CGGTCTGGAC CGTCCTGCGC AAGGCGCCGC CGCTGCCTTT CCTGCCCGAA
GCGGTCCATG GCCAGGAGGT GGTCATACTG GCGCTGCTCT ACACGGGTGA TCCAGAGCAA
GGCAAGACGC TGATCGCGCC GCTGCACGCC TTTGGCAAAC CGGTCGGCGC GCATGTCGGC
GTCATGCCTT ATGTGGACTG GCAGAAGGCC TTTGATCCGC TGTTGACGCC CGGCGCCCGC
AACTACTGGA AATCGCACAA TTTCTCGAAA CTGGAGGACG GATTGCTCGA CGCCGTCATC
GAGTACGTCG GCAAGCTGCC GTCGCCGCAG TGCGAGATAT TCTTTGCTGC CATCGGCGGC
GCGACCACCC GGCCCGCGCC CGACGCCATG GCCTATGCGC ACCGCGACGC CCGCTTCGTC
ATGAACGTCC ACGGCCGCTG GGACGACCCG GCCGACGACG CGGCCTGCAT CCGCTGGGCG
CGCGACTATT TCAAGGCCTC GGCGCCATTT GCCAGCGGCG GCGTGTACGT CAACTTCCTG
ACCGCCGACG AGGGTGAGCG CGTGAAGGCG GCCTATGGCC AGAACTATGA AAGGCTCGCG
CAGGTCAAGC GCCGCTACGA CCCGGCCAAC CTGTTCAGCA CCAACCAGAA CATCCAGCCT
GCGTGA
|
|---|
| Protein sequence | MNNLQATQIK ALKAGIQGEV ILPEDASFDT ARQVWNAMID KHPAAIVRCA ATPDVVHAVN
FAREQGLRLA VRGGGHNIAG SAVCDDGIVI DLSQMKAAYI DTSNRRASIE GGATLADFDA
AAQVHGLAVP LGINSTTGVA GLTLGAGFGW LSRKYGMTID SLESAEVVTA AGEVLRASAT
EHPDLFWALR GGSGNFGVVT RFGFRLHPVG PNVLAGLIVY PFAEAKTVLQ QYREFTDQAP
DELSVWTVLR KAPPLPFLPE AVHGQEVVIL ALLYTGDPEQ GKTLIAPLHA FGKPVGAHVG
VMPYVDWQKA FDPLLTPGAR NYWKSHNFSK LEDGLLDAVI EYVGKLPSPQ CEIFFAAIGG
ATTRPAPDAM AYAHRDARFV MNVHGRWDDP ADDAACIRWA RDYFKASAPF ASGGVYVNFL
TADEGERVKA AYGQNYERLA QVKRRYDPAN LFSTNQNIQP A
|
|---|
| |