| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2685 |
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| Symbol | |
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| ID | 4689913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2826983 |
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| End bp | 2829877 |
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| Gene Length | 2895 bp |
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| Protein Length | 964 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639835693 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_982908 |
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| Protein GI | 121605579 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.941593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGATGC CATCCGCCAC GCCGCTGGGC GCGCTTGAAA ATCCTTCCGA ATTCATTGCC
CGCCACATCG GCATTGACGA GGCTGACGAA GTCCACATGC TCGGCGTCGT CGGCTCGGCC
TCGCGCCGGG AACTGATCGA TGGCATCGTT CCGCGCTCGA TTGCCCGCAG CAGCGCCATG
GCGATTCCGC CACCCGTCAC GGAAGCGGCC GCGCTCAAGC AACTCAAGGC CATGGCCGCC
AAGAACAAAG TCTTCAAGAG CTTTATCGGC CAGGGCTATT ACGGCACCTA CACGCCCGCC
GTGATTTTGC GCAACGTGCT GGAAAACCCC GCCTGGTACA CCGCCTACAC GCCCTACCAG
GCCGAGATTT CGCAGGGCCG CATGGAAGCG CTGATCAACT TCCAGACCAT GGTCTGCGAC
CTGACCGGCA TGCCGATGGC CAATGCGTCG ATGCTCGACG AAGCCACGGC CGCCGCCGAA
GCCATGACGC TGGCCAAACG CAGCGTGAAA AGCAAAAGCA ATGTGTTCAT CGTCGCGGGC
GACTGCCATC CGCAAACCAT CGAAGTGATC CAGACGCGCG CCAAGCCGCT GGGCATTGAA
GTCAGGGTCA GCACCGCCTC CGCCAGCCTG ACGCAACTGA TGGCCGAGGG CAACTACTTC
GGCGTGCTCG CGCAATACCC GGCCACCAGC GGCGCGATTC ATGACCTGCG CCCGCTGGCG
GTGCTTGCCC ATGCCGTGGG CGCTGCCGTG TGCGTCGCCG CCGATCTGCT GGCGCTGACG
CTGCTTCAGC CGCCCGGCGA ATGGAATGCC GACATCGTGC TGGGCAGCAC CCAGCGCTTT
GGCATGCCGA TGGGCAACGG CGGCCCTCAT GCCGCTTACC TCGCCTGCCG CGACGAATTC
AAGCGCTCCA TGCCCGGCCG GCTGGTCGGC GTGAGCGTTG ACAGCCACGG CCACCCGACC
TACCGGCTGG CGCTGCAAAC CCGCGAACAG CATATTCGCC GCGAAAAAGC CACGTCCAAC
ATCTGCACCG CGCAGGTGCT GCCGGCCGTG ATGGCCAGCA TGTACGCGGT CTATCACGGC
CCGCAAGGCT TGAAGCGCAT TGCCGAGCGC GTCGCCACCT ACACTGCGAT TTTTGTCCAT
GGCCTGCGCG AGATGGGCTA CGACATCACC AACCAGGGTG CTTTCGACTC GGTCACCATC
AAGACCGGCG ACGCTACCAA TTCAATAGCT GAACGCGCCC GCCAGTCGTG CGCAAACCTT
AGATTTCGCT TAAAAAATCA CCTCGGCGTG TCGCTCGACG AGACCACCAG CCGCTCCGAC
ATCGAAATGC TCTGGTCCTT CTTTGCCAGG CCCGGACAGA CCGTGCCGGT GGTCAGCCGC
TTCGAGCAAG GCATCGAGTC CTTGATTCCG GCCGGGCTGC GCCGCACCAG CGCTTTTCTC
ACGCATCCGG TGTTCAACAC CCACCATTCC GAAACCGGGA TGCTGCGCTA CATCCGCAAG
CTCAGCGACA AGGACCTGTC GCTGGACCGC AGCATGATTC CGCTGGGCAG CTGCACCATG
AAGCTCAACG CGACCAGCGA GATGATTCCC ATCACCTGGC CGGAGTTCGC CAACATCCAT
CCGTTTGCCC CGCACGACCA GCTGCTGGGC TATGCCGAAC TCGACCAGCA ATTGCGCGAC
TGGCTGTGCC AGGCGACGGG TTATGCCGGC ATCAGCCTGC AGCCCAATGC CGGATCGCAG
GGCGAATACG CCGGGCTGCT GGTCATCAAG GCTTATCTAG ACGCCAATGG CCAGGGCCAC
CGCAACATCT GCCTGATTCC GTCGTCGGCC CACGGCACCA ATCCGGCCAG CGCCCAGATG
GCCGGCATGA CGGTGGTCGT GACGGCCTGC GATGCGCAGG GCAATGTCGA TATGGCCGAC
CTGAAGGCCA AGTGCGAAAA GCACAGCGCT AATTTAGCCT GCGTGATGAT CACCTACCCG
AGCACCCACG GCGTGTTCGA GACACAGGTC AAGGAACTCT GCCAGCTGGT GCATTCGCAC
GGCGGCCGGG TCTATGTCGA TGGCGCCAAC ATGAATGCGC TGGTCGGCGT GGCAGCGCCC
GGCGAATTCG GCGGCGACGT GAGCCACCTC AATTTGCACA AGACCTTCTG CATTCCGCAC
GGCGGCGGCG GACCGGGCGT GGGTCCGGTC TGCGTCGTGG CCGATCTGGT TCCCTACCTG
CCCGGCCATG CCACGGCGGG CATTCATGTC AACGGCGTCG GCGCGATTTC GGCCGCGCCG
CTGGGCAATG CGGCCGTGCT GCCGATCAGC TGGATGTACT GCCGCATGAT GGGGCCTGAA
GGATTGAAGC AGGCGACCGA GGTGGCGATT TTGAGCGCCA ACTACATCAG CGCCCGGCTG
AAGGACTGCT ACCCGACGCT CTACGCCAGC GAGAACGGCC ATGTCGCGCA CGAGTGCATC
CTGGATCTGC GCCCGCTCAA GGAAACCAGC GGCGTGACGG CCGAGGACGT GGCCAAGCGC
CTGATGGACT ACGGCTTTCA TGCGCCGACG CTGAGCTTTC CGGTGCCCGG CACGCTGATG
GTCGAGCCCA CCGAAAGCGA AACCCTGGCC GAACTGGACC GCTTCATCAA CGCCATGATC
GCCATCCGCG AAGAGATTCG CCAGGTCGAA AACGGCCACT GGCCGCAGGA CAACAATCCG
CTCAAGCATG CGCCGCACAC GGCGGCCAGC CTGATGGGCG CCGACTGGGA CCGCCCGTAT
TCACGCGAAA CCGGCGCCTT CCCGCTGGCC AGCCTGAAGG CGGTGAAATA CTGGCCGCCA
GTGGGCCGGG TGGACAACGT CTATGGCGAC CGCAATTTGT CGTGCAGCTG CATTCCGGTG
GCGGACTACG CCTGA
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| Protein sequence | MLMPSATPLG ALENPSEFIA RHIGIDEADE VHMLGVVGSA SRRELIDGIV PRSIARSSAM
AIPPPVTEAA ALKQLKAMAA KNKVFKSFIG QGYYGTYTPA VILRNVLENP AWYTAYTPYQ
AEISQGRMEA LINFQTMVCD LTGMPMANAS MLDEATAAAE AMTLAKRSVK SKSNVFIVAG
DCHPQTIEVI QTRAKPLGIE VRVSTASASL TQLMAEGNYF GVLAQYPATS GAIHDLRPLA
VLAHAVGAAV CVAADLLALT LLQPPGEWNA DIVLGSTQRF GMPMGNGGPH AAYLACRDEF
KRSMPGRLVG VSVDSHGHPT YRLALQTREQ HIRREKATSN ICTAQVLPAV MASMYAVYHG
PQGLKRIAER VATYTAIFVH GLREMGYDIT NQGAFDSVTI KTGDATNSIA ERARQSCANL
RFRLKNHLGV SLDETTSRSD IEMLWSFFAR PGQTVPVVSR FEQGIESLIP AGLRRTSAFL
THPVFNTHHS ETGMLRYIRK LSDKDLSLDR SMIPLGSCTM KLNATSEMIP ITWPEFANIH
PFAPHDQLLG YAELDQQLRD WLCQATGYAG ISLQPNAGSQ GEYAGLLVIK AYLDANGQGH
RNICLIPSSA HGTNPASAQM AGMTVVVTAC DAQGNVDMAD LKAKCEKHSA NLACVMITYP
STHGVFETQV KELCQLVHSH GGRVYVDGAN MNALVGVAAP GEFGGDVSHL NLHKTFCIPH
GGGGPGVGPV CVVADLVPYL PGHATAGIHV NGVGAISAAP LGNAAVLPIS WMYCRMMGPE
GLKQATEVAI LSANYISARL KDCYPTLYAS ENGHVAHECI LDLRPLKETS GVTAEDVAKR
LMDYGFHAPT LSFPVPGTLM VEPTESETLA ELDRFINAMI AIREEIRQVE NGHWPQDNNP
LKHAPHTAAS LMGADWDRPY SRETGAFPLA SLKAVKYWPP VGRVDNVYGD RNLSCSCIPV
ADYA
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