Gene Pnap_2679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2679 
Symbol 
ID4689956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2820297 
End bp2821982 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content65% 
IMG OID639835687 
Productelectron-transferring-flavoprotein dehydrogenase 
Protein accessionYP_982902 
Protein GI121605573 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins)
[COG2440] Ferredoxin-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACC AAGAAATCCT GGCCCAGTAC GGCCCCCGAG AAGCGATGGA GTACGACGTG 
GTCGTGGTGG GAGGCGGCCC GGGCGGGCTG TCGGCGGCCA TCCGCCTCAA GCAACTCGCG
GCTGAAAAAG GCACGGAGCT GTCCGTCGTC GTGCTCGAAA AAGGCTCCGA GCCCGGCGCG
CACATCCTCT CGGGCGCGGT CATGGACCCC AGGGCCTTGA GCGAACTGAT CCCCGACTGG
AAGGCGCTCG GCGCGCCCTT GAGCCAGCCC GTCACGGCCG ACGAGGTGCT GTTCCTGAGC
GAAACGGGCT CCACCCGGAC GCCTGATTTC CTCGTGCCCG ACTGCTTTCA CAACGAAGGC
AACTACGTCA TCAGCCTGGG CAACGTCACG CGCTGGCTGG CTGGTCAAGC CGAAAGCCTG
GGCGTTGAAA TCTTCCCCGG CTTCGCCGCC GCCGAGGTGC TTTACAACGA CGATGGCTCC
GTCAAGGGCG TGGCCACGGG CAACCTGGGC GTTGGCAAGG ACGGTGAGCC GACCGGCAAC
TTCCAGCTCG GCATGGAGCT GCACGGCAAG TACACGGTGT TCGCCGAAGG CGCGCGCGGC
CACCTGGGCC GCCAGCTGAT CAGCCGCTTC AAGTTAGATG CGGGCAAGGA TCCGCAGGCC
TACGCGCTGG GCGTGAAGGA ACTCTGGGAG ATCGACCCGG CCAAGCACCA AGCCGGCCTG
GTGGTGCACA CGGCCGGCTG GCCGATGGAC AGCAGCACTT ATGGCGGGGG TTTTCTCTAC
CACCTGGAGG GCAACCAGGT CACGCTGGGC TTTGTCACCG GGCTGGACTA CAGCAATCCT
TATCTCAGCC CGTTCGAGGA GATGCAGCGC TGGAAAACGC ACCCGGCGAT CCGCAAATAC
CTCGAAGGCG GCAAGCGCAT CGGCTACGGC GCGCGGGCCA TCACGGCCGG CGGCGCTTTA
AGCCTGCCCA AGACGGTGTT CCCCGGCGGC GCGCTGGTCG GCTGCGAGGC GGGCTACCTC
AACGCCAGCC GCATCAAGGG CAGCCACGCG GCGATCAAGA CCGGCATGCT CGCGGCCGAA
GCGGCGTACG CGGCCGTGAC GGCCGGGCGC CAGCATGACG AACTGAGCGC CTACCCCGAG
GCTTACGAAA AAAGCTGGCT GGCCGCCGAA CTCAACCAGG CGCGCAACTT CAAGGCCTGG
TTCAAGAAGG GCGTGTACGT GGGCTCCTTG ATGACCGGCA TCGAGCAATG GCTGCTGCCC
AAAATCGGCG TCAAGAGCCC GCCGTGGACG ATCCACCGCG ACAAGCCTGA TTACGCGATG
CTCAAGCCGG CATCCGAGTG CCAGCCCATC CTTTATCCCA AGCCCGACAA CAAGCTGACG
TTTGACCGCC TGACCTCGGT GTTCATCAGC AACACCAACC ACGAGGAACA CCAGCCCGCG
CATTTGACGC TGAAGGACGC CAGCGTTCCG GTCGCTATCA ACCTGGCCAA GTTCGCCGGC
CCCGAGAGCC GCTACTGCCC GGCAGGCGTC TATGAGTTCG TGAAGAACCC GGACAACACC
GACCGGCTGC AGATCAACGC GCAGAACTGC GTTCACTGCA AGACCTGCGA CATCAAGGAC
CCGACGCAGA ACATCGTCTG GGTCACGCCC GAGGGCGGCG GCGGGCCGAA CTACAGCGGC
ATGTAA
 
Protein sequence
MNNQEILAQY GPREAMEYDV VVVGGGPGGL SAAIRLKQLA AEKGTELSVV VLEKGSEPGA 
HILSGAVMDP RALSELIPDW KALGAPLSQP VTADEVLFLS ETGSTRTPDF LVPDCFHNEG
NYVISLGNVT RWLAGQAESL GVEIFPGFAA AEVLYNDDGS VKGVATGNLG VGKDGEPTGN
FQLGMELHGK YTVFAEGARG HLGRQLISRF KLDAGKDPQA YALGVKELWE IDPAKHQAGL
VVHTAGWPMD SSTYGGGFLY HLEGNQVTLG FVTGLDYSNP YLSPFEEMQR WKTHPAIRKY
LEGGKRIGYG ARAITAGGAL SLPKTVFPGG ALVGCEAGYL NASRIKGSHA AIKTGMLAAE
AAYAAVTAGR QHDELSAYPE AYEKSWLAAE LNQARNFKAW FKKGVYVGSL MTGIEQWLLP
KIGVKSPPWT IHRDKPDYAM LKPASECQPI LYPKPDNKLT FDRLTSVFIS NTNHEEHQPA
HLTLKDASVP VAINLAKFAG PESRYCPAGV YEFVKNPDNT DRLQINAQNC VHCKTCDIKD
PTQNIVWVTP EGGGGPNYSG M