Gene Pnap_2626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2626 
Symbol 
ID4689853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2763806 
End bp2765203 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content65% 
IMG OID639835633 
Productethanolamine ammonia lyase large subunit 
Protein accessionYP_982849 
Protein GI121605520 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4303] Ethanolamine ammonia-lyase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.190636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGCC ATCAGTACAC CCACACCGCA GGATGCAGGA CTTACGGCTT TCACGACCTG 
AAAGACCTCA TGGCCAAGGC CACGCCGGCG CGCTCTGGCG ACCTGCTGGC CGGCGTGGCC
GCGCACAGCG CCGAGGAACG CGCCGTGGCG CAGATGGCGC TGGCCGAGGT GCCGCTGGCC
ACTTTCCTGA AGGAAGCACT GATTCCGTAT GAGCGCGATG AAATCACCCG GCTGATCATC
GACACGCACG ACGCGCCAGC CTTTGCGCCG GTCAGCCACC TGACGGTCGG CGACTTTCGC
AACTGGTTGC TCGGCGACGC AGTGGACAGC GAGGCGCTGG CGGCGCTGGC GCCCGGCATC
ACGCCCGAGA TGGCGGCGGC CGTAGCCAAG CTCATGCGCA ACCAGGACTT GATCCTGGTT
GCCAAAAAGT GCCGCGTCGT CACCCGGTTT CGCAACACGC TGGGCTTGGC CGGCCGCCTG
GCCACGCGGC TGCAGCCCAA CCACCCGACC GATGACGCCA GCGGCATCGC AGCCAGCCTG
CTCGACGGCC TGCTCTACGG CAGCGGCGAC GCCGTGATCG GCATCAACCC CGCCACCGAC
AATGTGCCGC AGGTCATCCG GCTGGTAACG ATGCTGAACG ACATCATCAG CCAGTACGCC
ATTCCGACCC AGTCCTGCGT GCTGACCCAC GTCACCAACA CCATTGAAGC CATCAACCGG
GGCGCGCCGG TCGATCTGGT GTTCCAGTCC ATAGGCGGCA CCGAGGCGAC CAACCGCAGC
TTCGGCGTGA GCCTTGATCT GCTGGGCGAG GCGCGCAGCG CGGCCTTGTC TTTAAATCGC
GGCACGCTGG GCGACAACGT CATGTATTTC GAGACCGGCC AGGGCAGCGC GCTGTCGGCC
AATGCCAATT TCGGCATCGA CCAGCAAACC TGCGAGGCGC GCGCCTATGC CGTGGCGCGC
CAGTTCAAGC CGCTGCTGGT CAACACCGTG GTCGGCTTCA TCGGCCCCGA ATATTTGTTC
GATGGCAAGC AGATCATCCG CGCCGGACTC GAAGACCATT TCTGCGCCAA GCTGCTCGGG
CTGCCCATGG GCTGCGATGT CTGCTACACC AACCACGCCG AAGCCGACCA GAACGACATG
GACGTGCTGC TGACGCTCCT TAGCGTGGCC GGCTGCAATT TCGTGATGGG CATTCCGGGC
TCGGACGACA TCATGCTGAA TTACCAGACG ACTTCGTTCC ACGACGCCCT GTACGCGCGC
CGCGTGCTGG GCCTGCGGCC TGCGCCGGAA TTCGAGGCCT GGCTGCAGAA GATGGATATT
TTCAGCAAGG ACGCGCAGTT CCGGCTGAAT CCGTCGCTGC CGCCGGCTTT CCACAAGGCG
CTGCTGCGCC TGCCTTGA
 
Protein sequence
MKRHQYTHTA GCRTYGFHDL KDLMAKATPA RSGDLLAGVA AHSAEERAVA QMALAEVPLA 
TFLKEALIPY ERDEITRLII DTHDAPAFAP VSHLTVGDFR NWLLGDAVDS EALAALAPGI
TPEMAAAVAK LMRNQDLILV AKKCRVVTRF RNTLGLAGRL ATRLQPNHPT DDASGIAASL
LDGLLYGSGD AVIGINPATD NVPQVIRLVT MLNDIISQYA IPTQSCVLTH VTNTIEAINR
GAPVDLVFQS IGGTEATNRS FGVSLDLLGE ARSAALSLNR GTLGDNVMYF ETGQGSALSA
NANFGIDQQT CEARAYAVAR QFKPLLVNTV VGFIGPEYLF DGKQIIRAGL EDHFCAKLLG
LPMGCDVCYT NHAEADQNDM DVLLTLLSVA GCNFVMGIPG SDDIMLNYQT TSFHDALYAR
RVLGLRPAPE FEAWLQKMDI FSKDAQFRLN PSLPPAFHKA LLRLP