Gene Pnap_2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2606 
Symbol 
ID4689254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2742388 
End bp2742840 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content63% 
IMG OID639835613 
ProductRbsD or FucU transport 
Protein accessionYP_982829 
Protein GI121605500 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4154] Fucose dissimilation pathway protein FucU 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAG GCATCGATCC CCTGATCACG CCCGAGCTGC TCAAGCTGCT GATGGAAATG 
GGCCATGACG AGGCCGTGCT GCTGGCCGAT GCCAACTTCA CGGCCCTGAG CCTGGGCGCG
GGCAAGCCGG TCATCCGGCT GCCCGGCGCC GGCATGGCGC AGGTGGTCAA GGCCATCAAT
GCGCTGCTGC CGCTGGCCGC CGATGTGGCG CATCCGGTGG CTTTCATGCA GGTATCAAGC
ACAGAGCCGC CCTACCTGTC GGCCTTGCAG CGCGAGGTGC TGGACTTGCT CAAGGACAGC
CTGCTGCCCC ACCAGCAGGC CGAGCCGGTG GAGCGCTATG CGTTCTACGA ACGCGTGCAA
AAGGCCTGCG CGATTGTGGT GACCGGCGAA TTGCAGCCTT TTGGCAACTT TATCTTGCGC
AAAGGCGTTA TCGGCGAAAC TCTACGCCCA TGA
 
Protein sequence
MLKGIDPLIT PELLKLLMEM GHDEAVLLAD ANFTALSLGA GKPVIRLPGA GMAQVVKAIN 
ALLPLAADVA HPVAFMQVSS TEPPYLSALQ REVLDLLKDS LLPHQQAEPV ERYAFYERVQ
KACAIVVTGE LQPFGNFILR KGVIGETLRP