Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2604 |
Symbol | |
ID | 4689268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2740617 |
End bp | 2741570 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639835611 |
Product | inner-membrane translocator |
Protein accession | YP_982827 |
Protein GI | 121605498 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.104291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTT CAAAATTACC CTCCATTGCG AAACTGGGGC CTTTTATTGC CTTGCTGCTG GCCTGCGTTT TCTTCGCAAC CCAGAACGAA CGATTTTTAA CGCTCCAGAA TTTCTCGCTG ATCATGCAGC AGGTCATGGT GGTGGGCGTG ATTGCCATCG GGCAGACGCT GATCATCCTG ACGGCCGGCA TTGACCTGTC TTGCGGCATG GTCATGGCGC TGGGCGGCAT CGTGATGACC AAGCTGTCGG CCGACTTCGG CCTTCCCACA CCCGTAGCGA TTGCCTGCGG CATGGCGGTG ACCATGCTGT TCGGCCTGAT CAACGGCCTG CTGGTGACGC GCATCAAGCT GCCGCCCTTC ATCGTCACGC TGGGCACGCT GAACATCGCC TTTGCCATCA CCCAGCTGTA TTCCCAGTCG CAAACCGTGA CCGATATTCC GGCCGGCATG ACCTTCCTGG GCAACACCTT CACCATCGGC AATACCTCCA TGGGTTATGG CGTGGTGCTG ATGCTGGCCC TTTATGTGGC GACCTGGCTC TGGCTGCGCG AAACAGCCCC CGGCCGCCAT ATCTATGCCG TCGGCAACAG CCCCGAAGCG ACCCGCCTGA CCGGTATCGC GACCGACCGG GTGCTGCTGG GCGTGTATGT GCTGGCTGGC CTGTTTTATG GCATTGCCTC GTTGCTGTCC GTTGCCCGCA CCGGTGCCGG CGACCCGAAC GCCGGCCAGA CTGAAAACCT GGACGCCATC ACCGCCGTGG TGCTGGGCGG CACCAGCCTG TTTGGCGGGC GCGGCATGCT GCTGGGCACG CTGGTGGGCG CCTTGATCGT GGGCGTGTTT CGCAATGGCT TGACGCTGAT GGGCGTTTCC TCGGTTTACC AGGTTCTGGT GACCGGCATT CTGGTGATTC TTGCCGTCAC CACTGACCAG ATGTCTCGCA AGGGAGTACG TTAA
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Protein sequence | MNTSKLPSIA KLGPFIALLL ACVFFATQNE RFLTLQNFSL IMQQVMVVGV IAIGQTLIIL TAGIDLSCGM VMALGGIVMT KLSADFGLPT PVAIACGMAV TMLFGLINGL LVTRIKLPPF IVTLGTLNIA FAITQLYSQS QTVTDIPAGM TFLGNTFTIG NTSMGYGVVL MLALYVATWL WLRETAPGRH IYAVGNSPEA TRLTGIATDR VLLGVYVLAG LFYGIASLLS VARTGAGDPN AGQTENLDAI TAVVLGGTSL FGGRGMLLGT LVGALIVGVF RNGLTLMGVS SVYQVLVTGI LVILAVTTDQ MSRKGVR
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