Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2591 |
Symbol | |
ID | 4688688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2723682 |
End bp | 2725073 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639835599 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_982815 |
Protein GI | 121605486 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.422822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.340429 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCCC AAGTGACGAC TCCGCCCATC CCCGCCAGGA CGGCTCCCGC GACACCCGCC AAGCGCCCGA GCCGCCGCGC GCGCGTCGTC GGCGGCCTGC TGGCCGTTCT GGCGCTGGGC GGCACCGGCT GGCTGGCCTG GCACCTGACG CATCCCGCCA CGCCAGCAAG CGCTGCCGCC GGACCCGGCG CGGCCGGCGG GCGGCGCGGC GCACCGGCCA CCACCGTCGG CGTGGCCACG GCCGAAAGCA CCCGCATCCC CATCCTCCTC GAAGCCCTGG GCACGGTCAC GCCGCAGGCC ACCGTCAAGG TGCGGCCGCA GGTCTCGGGC GTGATGGAAA AAGTGCTGTT CAAGGAAGGC CAGATGGTGC GCGCCGGCGA CCTGATGGCG ACCATCGATC CGCGCCAGTT CGAACTCGCG CTGATGCAGG CCAGCGGCCA GCGCCAGCGC GACGAGGCGC AGCTGGCCAG CGCCCGCGTC ACGCTTGAGC GTTTCAAGAC GCTGCTGGGG CAGGACTCGA TTGCCCGCCA GGAGGTCGAT ACCCAGGCCG CGCTGGTCAA GCAGCTTGAA GGCACGGTGG TGATCGACAA GGCCAATGAA GGCACGGCGC GGCTAAACCT GGGCTATGCC CGCGTGGTCG CGCCCATCAG CGGACGCGTC GGCCTGCGCA CGATCGATGT GGGCAACGTG GTCAGCAGCA GCGACGCCAA CGGCATTGCG GTCATCACGC AGGTCAGCCC GATTGACGTG GTGTTTGCCG TGCCGCAGGA CCAGGCCGGC GAACTGCAGC AGGCCGCCGT GGCCGGCACG GCCATGAAGG TCACCGCGCT CGACCGGACC CGCGCCAGCG CGCTGGACGC CGGCATGTTC GCCTCGCTGG ACAACCAGGT CGATACCACG ACCGGCACGG TCAAGGCCAA GGCGCGTTTC GCCAACAGCC AGTTGGCGCT GTTCCCCAGC CAGTTCGTCA ATGTGCGGCT GGAGTTGCGC ACGATTGAAA ACGCAGTCAC GGTGCCGGTG GCGGCGCTGC GCCACGGCAA TGCCGGCGAC TATGTGTATG TGGTCAATGC GGCCGAACGC ACCGTCAGCC TGCGGAAGGT AGAACGCGGC CAGGCCACGG CGGACAAGAT CCAAATCGCC TCCGGCCTGA AGGCGGGCGA GCAGGTCATC ACCGAAGGCG CCGACCGGCT CAAGGACGGC GCATCGGTGG TGCTGCCGGG CGACAGCCCC AAAGGCATGA ACGGCGGCGG CAAGCGCCAG CGGCCCGACG GTTCACCGCG TGGCCCCAGG CCGGGCGCTT CCGCAGCCGC CGAATCGCCG GTGTCCGCAC CGGCAGCCGG CGCCTCCAGC CCGCAACGCC ATCGGCGCGC TTCGCAAGCC GAGGGCGCAT GA
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Protein sequence | MDPQVTTPPI PARTAPATPA KRPSRRARVV GGLLAVLALG GTGWLAWHLT HPATPASAAA GPGAAGGRRG APATTVGVAT AESTRIPILL EALGTVTPQA TVKVRPQVSG VMEKVLFKEG QMVRAGDLMA TIDPRQFELA LMQASGQRQR DEAQLASARV TLERFKTLLG QDSIARQEVD TQAALVKQLE GTVVIDKANE GTARLNLGYA RVVAPISGRV GLRTIDVGNV VSSSDANGIA VITQVSPIDV VFAVPQDQAG ELQQAAVAGT AMKVTALDRT RASALDAGMF ASLDNQVDTT TGTVKAKARF ANSQLALFPS QFVNVRLELR TIENAVTVPV AALRHGNAGD YVYVVNAAER TVSLRKVERG QATADKIQIA SGLKAGEQVI TEGADRLKDG ASVVLPGDSP KGMNGGGKRQ RPDGSPRGPR PGASAAAESP VSAPAAGASS PQRHRRASQA EGA
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