| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2558 |
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| Symbol | |
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| ID | 4687234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2695115 |
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| End bp | 2697397 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639835566 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_982782 |
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| Protein GI | 121605453 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.897783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0361628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCACACC CTTCCGCACG CCCTGCCCGC ACCCGGCGCA CCGCCGCATC CCGTACCAGC
CACGCCGGCA ATCCTTCATC CAATGACTTG CGGCCAAGCC CCTTGTCTTC TGAACGGGCG
CTGCTGCCTT TGGGCGCGCT GATGCTGGCC GCTTCATTCG GCAGCTGGGC CCAGACCAGC
ATGACGCCGG ACAAGACACT GAAGACGGTG ACCGTGACCG AGACGGCCGA AGCACCCGAA
GGAAAAGATT CCCTGCGCGC CACCGAGACG ACCATCGGCA AGGGCAAGCA AAAACTGCGC
GATATTCCGC AGTCGATCAC CGTCGTCACC GAAAAGCTGA TCGATGACCG CAACCTGGAC
ACCTTCAAGG AAGCGCTGAA AAACACCTCC GGCATTTCTT TCGTCGCGGC GGAAGGCGGC
GAGTCGGACA TCAAGCTGCG CGGCTTCTCA TTGGCCGCCA CCGGCGACAT TTTTGCCGAC
GGCATACGCG ACCCGGCTTT TTATGACCGT GATACCTTCA ACCTGGACCG CCTGGAAGTC
ATGCGCGGAT CAGCCTCGAT GCTGTTTGGC CGGGGCTCCA CGGGCGGCGC AGTCAACCAG
GTCAGCAAGG CCCCGCGCCT GATCGACGAG CACCAGGTCG ATCTGACGCT GGGCAGCCAT
GACTATCGCC GCGTGGTCGG CGACTTCAAC CTGAAAACCG GCGAAAGCGC CGCGCTGCGG
ATCAATGCCA TGGTCACCAC GGCGGACAAC GACGGGCTGG GCAACAGCCT TGACAAAAAG
GGGCTGGCCG CCGCCTACCG CTGGGGCATC GGCGAGCGCG ACGAGTTTTC CGTGAGCATC
TACAGCCTGG ACAACAAAAA CGGCGTCAAC TACGGCCTGC CGTGGATCAA GCCGACCAGC
ACTTCGCCAG ATTCGGCCAC TACCATCCTG CCAGTGGACC CCAAAACTTA CTATGGGCTG
GCCAGCGACT ACAACGACGG CAGCGCGAAC TACGCCACGC TGTCGCATCT GCATCGGTTC
GACGATGGCA GCGAACTCAA AACACAGCTG CGAAAAGGTG TTTACACCCG CGACCAGAGA
GCGAGCACGG TGCGCCGGTC TCCCACCACG ACCAGTTTGG AAACTTTAAA TCCGAATACC
GTTTTTACGA GAAATTCACA GCCGAAGATT CAGGATCTGA ATACAGTGTT TGTCCAGAGC
GATTTCAGCA GCAAGTTCAA TGCGCTCGGC GTGCAGCATG AAATTTTGAC CGGAGTGGAC
CTGGCGCAGG AAAAGAAAAC TGTTTATGCC GCCCGCACAC CCGCGCAAGG TGGTGTGACC
AACACAAAAC CACCCACCAC ATTTGGAACG CCTAGTGACG GTGCATGGTT CGACGAAAGC
TCGCGCGTCC TGCGACTCAA TAATCACTAT GAATCAACCG GCTGGGGCGT CTATGCCCAG
GACATGATTC AGGTGGCGCC GCACTGGAAA GTGTTGGCAG GGCTGCGCTA CGACAGTTTG
GTAGGTGACT ATGACAGTTA TACAGTTAAC CCTGACGTCA AAACCAGCTA CAAAATGAAA
GTGTCCGAGT GGAGCCAGCG CCTGGGCCTG CTGTACCAGC CGAACGACCT GCACTCCTAC
CATGTGTCGG CCGCAACCTC GTTCAATACT TCCGGCGATG CTTATTCATT AAGCTCAGCC
AATGTGAACA TCGACCCCGA GAAAAGCATC AACCTCGAAC TGGGCGCCAA GCTGGACTCG
GCCGATAAGC GCTTCACCAC GCGGCTGGCG CTGTTCAGGT CCACCAAGCT GCATGAGCGC
AACACCGACC CGCTGGTCAC AAACCTGGTC ACGCTTTCCG GCAAGCGCCA TGCCATCGGC
GCGGAAGTCG ATTTCAGCGG CCGCCTGACC CCGGCATGGG AAATTTATGG CTCCTTCATG
TGGATTCCGA GCGCCAAGAT CGACATCGGC GTTGCGGGCT CCGAAGGACA GGGCACGCGC
CCGTCGAACA CGCCAAAAGT CAGCGGCACC TTCTGGAATA CCTACCAGAT CAATCAGCAG
TGGCGAGTTG GCGCCGGCCT GAACTTTCGT GGCAAGCAAA CCCCCATCCG CAACCCTGGC
TGGGAAGTGG ACAGCTACGT CACGGGCGAC CTGATGGCCG AATACAAGGT TAGCGAGAAC
TTCATCGTCA AGGCCAACCT GAGCAATGTG ACCAACAAGC TGTACGCAGA CCAGTTGTAC
ACCGGCCATT ACATTCCCGG CCCAGGACGC TTGTTCCAGG TCACGGGAAG TATCAAGTTC
TAA
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| Protein sequence | MAHPSARPAR TRRTAASRTS HAGNPSSNDL RPSPLSSERA LLPLGALMLA ASFGSWAQTS
MTPDKTLKTV TVTETAEAPE GKDSLRATET TIGKGKQKLR DIPQSITVVT EKLIDDRNLD
TFKEALKNTS GISFVAAEGG ESDIKLRGFS LAATGDIFAD GIRDPAFYDR DTFNLDRLEV
MRGSASMLFG RGSTGGAVNQ VSKAPRLIDE HQVDLTLGSH DYRRVVGDFN LKTGESAALR
INAMVTTADN DGLGNSLDKK GLAAAYRWGI GERDEFSVSI YSLDNKNGVN YGLPWIKPTS
TSPDSATTIL PVDPKTYYGL ASDYNDGSAN YATLSHLHRF DDGSELKTQL RKGVYTRDQR
ASTVRRSPTT TSLETLNPNT VFTRNSQPKI QDLNTVFVQS DFSSKFNALG VQHEILTGVD
LAQEKKTVYA ARTPAQGGVT NTKPPTTFGT PSDGAWFDES SRVLRLNNHY ESTGWGVYAQ
DMIQVAPHWK VLAGLRYDSL VGDYDSYTVN PDVKTSYKMK VSEWSQRLGL LYQPNDLHSY
HVSAATSFNT SGDAYSLSSA NVNIDPEKSI NLELGAKLDS ADKRFTTRLA LFRSTKLHER
NTDPLVTNLV TLSGKRHAIG AEVDFSGRLT PAWEIYGSFM WIPSAKIDIG VAGSEGQGTR
PSNTPKVSGT FWNTYQINQQ WRVGAGLNFR GKQTPIRNPG WEVDSYVTGD LMAEYKVSEN
FIVKANLSNV TNKLYADQLY TGHYIPGPGR LFQVTGSIKF
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