| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2546 |
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| Symbol | ompR |
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| ID | 4686203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2683542 |
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| End bp | 2684279 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639835554 |
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| Product | osmolarity response regulator |
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| Protein accession | YP_982770 |
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| Protein GI | 121605441 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.16006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTCAAG CTCAAACCAC TGCCCGCGCC GACAAAATCT TGATCCTCGA TGATGACGCA
CGCATCCGAG ACCTGCTACG CCGCTACTTG GCGCAGGAAG GTTTTGACGT GATCCTTGCC
GAAGACAGCA AGGCATTGAA CCGCATCATG CTGCGCGATG CGGTTGACCT GATCGTGCTC
GACCTGATGA TGCCCGGCGA AGACGGCCTG TCGATTTGCC GGCGCCTGCG CGCGGCCAAC
GACCGCACGC CCATCATCAT GCTGACCGCC AAGGGCGAAG ACGTGGACCG CATCGTCGGC
CTGGAAGTCG GCGCCGACGA TTACCTCGCC AAGCCCTTCA ACCCGCGCGA ACTGCTGGCC
CGTATCCACG CCGTGCTGCG CCGCCGGCCC ACCGCCGAAG TGCCGGGCGC GCCGTCGAGC
GACCAGGAAG TGATCAACTT CGGCCCATTT TCCTTTGACA TGAGCCTGCG CACGCTGCAA
AAAAATGGCG AGGAACTGCC GCTGACCACC GGCGAATTCG CGATGCTCAA GACCCTGGTG
CGCCATCCAC GCCAGCCGCT GTCGCGTGAA AAGCTGGCCC AGCTGGCGCG CGGCCGGGAG
TTCGAGCCCT TTGACCGCAG CCTGGACGTG CAGGTCTCGC GCCTTCGCAA GCTGATTGAA
ACCGATGCGG CCGTGCCGCG CTACATCCAG ACCGTCTGGG GAATCGGCTA CGTGTTCGTG
CCGGACGGCA ACAGCTAA
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| Protein sequence | MLQAQTTARA DKILILDDDA RIRDLLRRYL AQEGFDVILA EDSKALNRIM LRDAVDLIVL
DLMMPGEDGL SICRRLRAAN DRTPIIMLTA KGEDVDRIVG LEVGADDYLA KPFNPRELLA
RIHAVLRRRP TAEVPGAPSS DQEVINFGPF SFDMSLRTLQ KNGEELPLTT GEFAMLKTLV
RHPRQPLSRE KLAQLARGRE FEPFDRSLDV QVSRLRKLIE TDAAVPRYIQ TVWGIGYVFV
PDGNS
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