| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2537 |
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| Symbol | |
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| ID | 4689692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2674053 |
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| End bp | 2676323 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639835545 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_982761 |
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| Protein GI | 121605432 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00663733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.650482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATA AAGTGGCGGC AACGCACGCC CCCGCAATTT CCCCGGACTC GCTCAGTTCC
ATCGTCGCGG CCACGGCCGA CAGCCTGCAC GGGCAGCCGC ATGTCCTGGT GCGTGCCCGC
GCTTTCGCCG AGCCGCTGAT TGCCAGCGAA GTGATGGACA CCGGCGAAAA CATCCTGGCG
CATGCCGATG CGGTGGTCGG TATTCTTAAA ACCATTGGCG GCTCCGAAGC GGTGCAGGCG
GCCACTTACC TGGTGCATTC CTGCCAGCAC CTCAACAAGC CGCAGGATGT CATCGCCAAG
GCTTTCGGCC CCAGCTATGC CGCTTTGGCG GTGGAAACCA CCAAGCTGAT CTATCTGCAG
CGACAGACGC GCGCCGTCGA TGCCAAGTCG CAGCTGCACG ATGACCCTGC CGCCCAGACG
GAGAACGTGC GCAGGATGCT GCTGGCGTTC TCGCGCGACT TGCGGGTGGT CATGCTGCGC
CTGGCTTCGC GCCTGCAGAC CTTGCGCTAT TACGCGGCCA GCCGACAGGC TGCGCCCAGG
GCCTTGGCGC ATGAGTCGCT GCATGTGTTT GCGCCACTGG CCAACCGCCT GGGCATCTGG
CAGATCAAGT GGGAGATGGA AGACCTGGCG TTTCGTTTTC TGGAGCCTGA CACCTACAAG
CAGATCGCCC GGCTGCTCGA TGAAAAACGT GCCGAGCGCG AGGTCTTCAT GGAGGCCCTG
CGCGCGCAGC TTGAACGCGA TTTGAACCAG AACGGCATTG CCGCGCTGGT GCAGGGCCGG
CCCAAGCACA TCTACAGCAT TGTCAAGAAA ATGCGCGGCA AGTCGCTGGG CTTTGACCAG
GTGTTCGACA TCCGGGCGCT GCGCGTGATT GCCGCCGATG TGAAGGGCTG CTATGCCGCG
CTGGGGTTTG TGCATTCGTG CTTTTCACCC GTCAACGGCG AGTTTGACGA CTACATCGCC
AAGCCCAAGC CCAACGGCTA CCAGTCGCTG CACACGGTCG TTCGTGATGA GGGCGGGCGG
GCCATGGAAA TCCAGATACG CACCCAGGCC ATGCACGACC ATGCCGAAAA CGGCGTGGCG
GCGCACTGGG CTTACAAGGA AGCCGGAACC AAAGGCTACG CCGGCGTTTC GGCCAGCAGC
GAATACGACG CCAAGATTGC GGTGCTGCGG CAACTGCTGG CCTGGGAGCG GGAACTTTCG
GGTCCGGCTG CGCAGCGTGC GCGGGATGCC AATCAGGGCC TGTTCGAGGA CCGCATCTAT
GTGCTGACGC CGGACGCAGC CATCGTCGAA TTGCCCCAGG GCGCCACGAC GGTTGACTTT
GCCTACAGCG TGCATACCAG CTTGGGCCAT CGCTGCCGCG GCGCGCGCAT TGACGGCGTC
ATGGTGCCGC TCAATACACC GCTGCAAAAC GGCCAGACGG TTGAAGTCAT CACGACCAAG
GAAGGCGGGC CTTCGCGTGA CTGGCTCAAC CCGGAGTTGG GTTTCCTGTC GAGCAACCGG
GCGAAATCGA AGGTGCGCGC CTGGTTCAAT GCGCTGGCCA TGGAGCAGAC CGTGGCCAAG
GGCCGGGAGG CGGTTGAAAA ACTGCTCCAG CGCGAAGGCA AAACGGCCAT GAAGCTGCAG
GATCTGGCGT TTCTGCTGGG CTTCAAGACG GCGGATGAAC TTTTTGAGGT CGTGGGCAAA
GACGAGTTTT CCTTGCGCAC CATTGAAAAC ATGCTCAGGC CCCCCGAACC TGCGCCGTCG
CCAGACGACT ATGTGCTGGC CAAAAAAACA CGGCAGTCCG AAAAATCCAG CGCTGCTGGA
AAAGGCGGCA AGGGCAGCGT GCTGGTGGTG GGAATGGACT CCCTGCTGAC CCAATTGGCC
AAATGCTGCA AACCCGCGCC CCCGGATGTC ATTCTTGGTT TTGTCACCAA GGGCAAGGGC
GTGAGCATTC ATCGAAGCGA CTGCAGCAAT TTCCGCAACA TGGCCACCGG CAGCCCTGAC
CGTGTCATCG AGGTGGAATG GGGGTCTGCA AAAGCCCCGG ACGGCGCGGT TTATCCGGTG
GATGTGGCCG TGGAAGCAGC TGATCGGCAA GGTTTGCTGC GCGATATTTC AGAAGTGTTT
GCCAAGGAAA AAATGAATGT GATCGGTGTG CAAACGCAGT CGGTCAAGGA CAACCGTGGC
GGGACAGCCT GGATGACCTT CACGGTCGAG GTGGCCCAAT CGGGACGGCT CAACCGGGTG
CTGGGCATCG TGGCCGATGT GCCGGGCGTG CGTTCAGCCC GAAGACGCTG A
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| Protein sequence | MKHKVAATHA PAISPDSLSS IVAATADSLH GQPHVLVRAR AFAEPLIASE VMDTGENILA
HADAVVGILK TIGGSEAVQA ATYLVHSCQH LNKPQDVIAK AFGPSYAALA VETTKLIYLQ
RQTRAVDAKS QLHDDPAAQT ENVRRMLLAF SRDLRVVMLR LASRLQTLRY YAASRQAAPR
ALAHESLHVF APLANRLGIW QIKWEMEDLA FRFLEPDTYK QIARLLDEKR AEREVFMEAL
RAQLERDLNQ NGIAALVQGR PKHIYSIVKK MRGKSLGFDQ VFDIRALRVI AADVKGCYAA
LGFVHSCFSP VNGEFDDYIA KPKPNGYQSL HTVVRDEGGR AMEIQIRTQA MHDHAENGVA
AHWAYKEAGT KGYAGVSASS EYDAKIAVLR QLLAWERELS GPAAQRARDA NQGLFEDRIY
VLTPDAAIVE LPQGATTVDF AYSVHTSLGH RCRGARIDGV MVPLNTPLQN GQTVEVITTK
EGGPSRDWLN PELGFLSSNR AKSKVRAWFN ALAMEQTVAK GREAVEKLLQ REGKTAMKLQ
DLAFLLGFKT ADELFEVVGK DEFSLRTIEN MLRPPEPAPS PDDYVLAKKT RQSEKSSAAG
KGGKGSVLVV GMDSLLTQLA KCCKPAPPDV ILGFVTKGKG VSIHRSDCSN FRNMATGSPD
RVIEVEWGSA KAPDGAVYPV DVAVEAADRQ GLLRDISEVF AKEKMNVIGV QTQSVKDNRG
GTAWMTFTVE VAQSGRLNRV LGIVADVPGV RSARRR
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