Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2494 |
Symbol | |
ID | 4688948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2630954 |
End bp | 2631538 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639835502 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_982719 |
Protein GI | 121605390 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.180368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTGAGC TCTTGATGAT GTGTGCACCC GCCGTCGATC CGGTCACCAT GGCCGCTGTT GTGAAGCAGG AATCCGGCGG CCAGCCCTGG GTGGTCAACA ACAACACGAC AAGAAAATCA ATGGCCTTTG CGTCCAAAGC TGTGGCCGTG GCCGCTGCGG TGGCGGCTGT CGGCCGTGGC GAAAGTGTTG ATATGGGGTT GGCGCAAATC AATAGCAAAA ATTTGCCCGC GCTGGGGCTG ACTGTGGAAC AGGTGTTCGA CCCCTGCACC AACATTGCTG CCGGGGCAAA CATTCTGGCT GCGAGCTATG GAAGAGCCGG CTCGCTCGGC GGCGCCCTGA GCATGTACAA CACCGGCCGG TTTGATTCAA AAATCGGCGC TACCTACGCC CAAAAGGTGT TCGGACAAGC CGGGGAAAAG GTACCCAGAA TACCGGGTGG GCAACTGGCA AAACTGCCTG AAACGTCTTC TTTTGCAGCC AACCCTGCCG CCATGGCGGC CGTGCGACTG ACGGTTACGC CGTCGCCGTT TGCTGCCGGG CTTTCGCCCG TGAGGACGGC TTTACAGCCC GCAAATTGGC GTTGA
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Protein sequence | MLELLMMCAP AVDPVTMAAV VKQESGGQPW VVNNNTTRKS MAFASKAVAV AAAVAAVGRG ESVDMGLAQI NSKNLPALGL TVEQVFDPCT NIAAGANILA ASYGRAGSLG GALSMYNTGR FDSKIGATYA QKVFGQAGEK VPRIPGGQLA KLPETSSFAA NPAAMAAVRL TVTPSPFAAG LSPVRTALQP ANWR
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