Gene Pnap_2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2486 
Symbol 
ID4689178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2624176 
End bp2624514 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content57% 
IMG OID639835494 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_982711 
Protein GI121605382 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.812063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA ACTGGACCGA TGCAGCAGCG CTTGCTGATG TTCCCGAGGG TGATGTGATG 
GCGGTGCAGG TTGCGGGCAA AGAAATCGCC CTGTACGAGG TGGATGGTGA AGTCTTCGCA
ACTGACAACA TCTGCACCCA CGGTGCCGCA CGCATGAGCG ACGGCTTCCT GGAAGGCCGA
GAAATCGAAT GCCCGCTGCA CCAGGGGCGT TTCGATGTGT GCTCCGGCAA GGCGATGTGT
GCGCCGCTGA CGGAAAACAT CCGCACCTAC CCCGTGAAGA TTGAAAACCT TCGCGTGATG
CTCAAGCTCG ACCAAGACTA TTTGCAGGAG GTAAGTTAA
 
Protein sequence
MTENWTDAAA LADVPEGDVM AVQVAGKEIA LYEVDGEVFA TDNICTHGAA RMSDGFLEGR 
EIECPLHQGR FDVCSGKAMC APLTENIRTY PVKIENLRVM LKLDQDYLQE VS