Gene Pnap_2481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2481 
Symbol 
ID4689545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2618892 
End bp2619800 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content56% 
IMG OID639835489 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_982706 
Protein GI121605377 
COG category 
COG ID 
TIGRFAM ID[TIGR03213] 2,3-dihydroxybiphenyl 1,2-dioxygenase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.538336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC AAGCAGCAGT CATTGAACTA GGATACATGG GCATTTCGGT CAAGGATCCC 
GCAGCGTGGA AATCCTTTGC CGCGAACATG CTGGGGCTTC AAGTCCTCGA TGAAGGTGAC
AAGGACCGCT TCTATCTGCG AATGGACAAT TGGCACCACA GAATCGTGGT CCATCACAAT
GGTCAAGATG ACCTTGAATA CTTGGGTTGG CGTGTCTCCG GTCAACCGGA ATTCGATGCA
TTGGGCCAAA AGCTCCAGGA CGCAGGCTAC AAAGTCCACG TGTGCGACAA AGCCGAAGCA
CAGGAACGCA TGGTGCTGGG CCTGATGAAG ACGGAAGATC CGGGTGGCAA CCCGACCGAG
ATTTTCTGGG GACCCCGGAT AGACCTGAAC AACCCTTTCC ACCCCGGTCG CCCCTTGCAC
GGCAAGTTCT TGACTGCTGA CCAAGGCCTG GGCCACTGCA TAGTGCGTCA GAGCGACGTG
GAAGCGGCGC GCAAGTTCTA CAGCCTGCTG GGCTTCCGTG GGGATGTCGA GTACCGCCTG
CCCCTGCCCA ACGGCATGAC CGCTGAACTG ACTTTCATGC ATTGCAACGC TCGCGATCAC
TCCATCGCGT TCGGCGCAAT GCCTGCGGCC AAGCGCATCA ATCATCTGAT GATTGAATAC
ACCCATCTGG AAGATCTGGG TTATACGCAC CAGCTTTTCA TGAAGAACAA GATTGACATC
GCATTGCAAC TGGGTATTCA TGCCAACGAC AAGGCGCTGA CGTTCTATGG TGCAACACCT
TCCGGCTGGC TGATCGAACC TGGGTGGCGA GGGGCTCCCT CCATGGCCGA ATCGGAATAT
TACGTCGGCG ACATCTTCGG CCATGCTATC GAGGCCACAG GATATGGTTT GGACGTCAAG
CTGAGCTAA
 
Protein sequence
MSKQAAVIEL GYMGISVKDP AAWKSFAANM LGLQVLDEGD KDRFYLRMDN WHHRIVVHHN 
GQDDLEYLGW RVSGQPEFDA LGQKLQDAGY KVHVCDKAEA QERMVLGLMK TEDPGGNPTE
IFWGPRIDLN NPFHPGRPLH GKFLTADQGL GHCIVRQSDV EAARKFYSLL GFRGDVEYRL
PLPNGMTAEL TFMHCNARDH SIAFGAMPAA KRINHLMIEY THLEDLGYTH QLFMKNKIDI
ALQLGIHAND KALTFYGATP SGWLIEPGWR GAPSMAESEY YVGDIFGHAI EATGYGLDVK
LS