Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2425 |
Symbol | |
ID | 4688022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2561038 |
End bp | 2562273 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639835435 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_982653 |
Protein GI | 121605324 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTGC TTTTGGAGAA CACCTTGAAA TTTACAAAAC CTGTCCTGTT GGGCGGTGTG TTGCTGGCGA CGGCCATGTT CGCGCAGTCG GCCTCGAACA AGCCCATCAA GATCGGGGAA ATCAACAGCT ATTCGACGAT GCCGCAGTTC ACCCAGCCTT ACCGCCAGGG CTGGCAACTG GCCGTCGAGG AAATCAATCT GTCCGGTGGC CTGCTGGGCC GCAAGGTCGA GGTGATTGCC CGCGACGACG CCGGCAAGCC CGAGGAAGCC CTGCGCCACG CCATCGAACT GACCTCGCGC GAAAAGGTCG ATGTGCTGGC AGGAGGCTAT CTGTCCAACG TCGGCCTGGC CCTGGCCGAC CATGCCCAGA AAAACAGACG GCTTTACATC GCCAGCGAGC CGCTGACCGA CGCCATCGTC TGGGACAAGG GCAACCGCTA CACCTTCCGG CTGCGCCCCA GCACCTACAT GCAGGCCGCC ATGCTGGTTG AGGAGGCAGC GAAAATGCCC GCCAGGCGCT GGGCGACGAT TGCGCCCAAC TACGAATACG GCCAGAGCGC GGTGGCCAGC TTCAGGGAAT TGCTCAAGGC CAGGCGGCCC GACGTGGAGT TCGTCGGCGA ACAGTGGCCG GCCCTGGGCA AGCTCGAAGC CGGAACCGCC CTGCAAGCCA TGATGCAAAG CAAGCCCGAC GCGATTTTCA ACGTGACCTT TGGCGCCGAC CTGGCCAAGC TGGTGCGCGA AGGCAACCAG CGCGGCATTT TCCCCAGGGT GCCGGTGGTC TCGATGCTGT CGGGCGAGCC GGAATACCTC GATGTGCTGA AAGACGAAAC GCCCAAGGGG TGGATCGTGA CCGGCTACCC GTGGGACCAG ATTGACTCCC AGGAGCACGC CAGCTTTGCC GCCAACTACT ACCGCCGCTT CAAGGAATAC CCCAAGGTCG GCTCGGTGGT CGGCTATTCG ACCATGCAGG CGATTTTTGC CGGCATCAAA AAGGCCAACT CGCTAGATAA CGAAAAGCTG GTCGTCACGC TGCGCGGCCT GAAGTTCAGC ACGCCCTTCG GCCCGGCCGA GTTCCGCGCC ATCGACCAGC AATCGACCAT GGGCGCCTAC GTCGGCAAGC TCGATATGCG CGGCAACAAG GGAACGATGG TGAACTGGCG CTACGCCGAC GGCAAGGCGT ATTTGCCGAG TGATGCGTAT GTCAAGGCGC GCCGCCCGGC TGATGCCATG AAGTGA
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Protein sequence | MALLLENTLK FTKPVLLGGV LLATAMFAQS ASNKPIKIGE INSYSTMPQF TQPYRQGWQL AVEEINLSGG LLGRKVEVIA RDDAGKPEEA LRHAIELTSR EKVDVLAGGY LSNVGLALAD HAQKNRRLYI ASEPLTDAIV WDKGNRYTFR LRPSTYMQAA MLVEEAAKMP ARRWATIAPN YEYGQSAVAS FRELLKARRP DVEFVGEQWP ALGKLEAGTA LQAMMQSKPD AIFNVTFGAD LAKLVREGNQ RGIFPRVPVV SMLSGEPEYL DVLKDETPKG WIVTGYPWDQ IDSQEHASFA ANYYRRFKEY PKVGSVVGYS TMQAIFAGIK KANSLDNEKL VVTLRGLKFS TPFGPAEFRA IDQQSTMGAY VGKLDMRGNK GTMVNWRYAD GKAYLPSDAY VKARRPADAM K
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