| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2419 |
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| Symbol | |
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| ID | 4687479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2554706 |
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| End bp | 2555755 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639835429 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_982647 |
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| Protein GI | 121605318 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.340472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAGC TCACACCTTT TCAACTGCGC CGGCGCTTTC TTGCCATTGC CGGCACCACC
GCCGCCTGGT GGGGGCTGGG AGCAGGCAGT GCCCACGCGC AGCCCGTGCC CGCCAAGGCT
GAAAAAGCCG CCGAGCCCTT GCAGCAACTG CAGCAACTCA GAATCGGCTA CCAGAAGTCC
GCCGTCAACC TGGTCATCCT GAAGCAGCAG GCCGTGCTCG AAAAGCGTTT TCCCGGCGCC
AAGATCACCT GGGCCGAGTT TCCGGCCGGC CCGCAACTGC TCGAAGCCCT GTCGGTCGGC
AGCCTTGAGT TCGGCCTGAC GGGCGATTCG CCGCCGGTCT TCGCGCAAGC CGCCGGCAAG
GATCTGGTGT ACGTGGCGGC CGAGCCGCCC AAGCCCGACA GCTCGGCGAT CCTGGTGCTG
GGCGACTCGC CGATCCAGAC GCTGGCCGAC CTCAAGGGCA GGAAAATCGC CCTGCAAAAA
GGCTCCAGCG CGCATTACCT GCTGGTGCGC GCGGTCGAGA AGGCCGGTTT GAAGTGGAGC
GACATCCAGC CCATCTACCT GGCGCCGGCC GATGCGCGCG CCGCGTTTGA ACGCAAGAGC
GTCGATGCCT GGGTGATCTG GGATCCGTTT TACGCCGCCA TCGAACTCGA CATCAAGCCG
CGCGTGCTGG CCACCGGCCG CGCGCTGTCG AGCAACAACT CGTTCTACCT GGCGTCGCGC
TCCTTTGCGA CACAGAACGG ACAGGCGCTG GCGGTGCTGC TGGAGGAACT GACGCGCGCC
GACACCTTCG CCCAGACCCA TCGCAAGGAG GCGATCAAGC TGATTGCCGA TTTCAGCGGC
CTGGATGCTG GCATCGTCAG CCTGTTCATC CAGCGCCGTC CGGCCTCGCC CGTCGGGCCG
CTGGGCGCCG AAACGGTCGC CGACCAGCAA CGCGTGGCCG ATGCCTTTTT CAAGCTGGGC
CTGATTCCCC GGCCCGTGCG GGTCGCGGAA ATCGTCTGGC ACGCCGATTC GGCCCGACTG
GCCCAGCTCA ACCCGATCAA CCGCAAATAA
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| Protein sequence | MYKLTPFQLR RRFLAIAGTT AAWWGLGAGS AHAQPVPAKA EKAAEPLQQL QQLRIGYQKS
AVNLVILKQQ AVLEKRFPGA KITWAEFPAG PQLLEALSVG SLEFGLTGDS PPVFAQAAGK
DLVYVAAEPP KPDSSAILVL GDSPIQTLAD LKGRKIALQK GSSAHYLLVR AVEKAGLKWS
DIQPIYLAPA DARAAFERKS VDAWVIWDPF YAAIELDIKP RVLATGRALS SNNSFYLASR
SFATQNGQAL AVLLEELTRA DTFAQTHRKE AIKLIADFSG LDAGIVSLFI QRRPASPVGP
LGAETVADQQ RVADAFFKLG LIPRPVRVAE IVWHADSARL AQLNPINRK
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