Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2396 |
Symbol | |
ID | 4689815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2526501 |
End bp | 2528681 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639835406 |
Product | Na+/solute symporter |
Protein accession | YP_982624 |
Protein GI | 121605295 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.79359 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATT TTTTTGGTCG CCGTGAAGGC GTTGCGCACT CCAAAAAACA GTTCAAGTCC CAACTGGACC GCGTTTATCG CTGGTTCACG CTGGGTTTTG TCGTTTATGT GCTGCTGCTG GGGGGGCTGG AGCGCTTGGG CATGCCGCAC TCATGGATAG GCATGACATT CTTGCTGTCC ACGATTGCTT TGTATGCCGG TATCGGCATC ATGACCCGCA CCACCGATGC CGCCGAATAT TACGTGGCGG GCCGCCGAGT CCCGGCGATT TATAACGGGA TGGCAATAGG GGCCGACTGG ATGTCGGCGG CTTCATTCCT GGGCCTGGCC GGCACGCTGT ACCTGACGGG TTATAGCGGT CTGGCATTCA TCATGGGATG GACGGGTGGC TATTGTCTGG TGGCGCTGGT GCTGGCCCCT TACCTGCGCA AGTTCGGGCA GTTCACCATT CCGGATTTCC TGGGCGAGCG CTACGGCGGG CATCTGCCGC GCTTTATGGG TTTGCTGGCA GCCATCCTGT GTTCATTCAC TTATCTGGTG GCGCAGATTT ACGGCGTCGG ACTCATCACG TCCTACCTGA CCGGTATTGC TTTCGAGCTG GGTATTTTTC TGGGGGTGGG CGGCATTTTG GTTTGCTCAT TTTTGGGCGG AATGCGAGCG GTGACCTGGA CGCAGGTGGC GCAATACATC ATTTTGCTGG TGGCCTACCT GATTCCGGTC GTCTGGCTGT CGGTCAAGCA GACCGGCATT CCTGTCCCGC AAGCGGTTTA CGGCTTTCAA CTGGAGAAAG TGACCGCCAA GGAAAAAGAG CTGGCGACAG ACCCCAAGGA GTTGGAGGTT CGTGCCCTAT TCAGCAAACG CGCAGAAGTC CTGGCCGAAA AAATGAAGCA TCCGGAGCTT TCGATGGCTG CCGACAAACT GGCTGCCACC AAAAAACTGG CAGCCCTGAA GGCTGGCAAT GCGTCGGTAG CCGAGGTTTC TGCCGCTGGC AAGGCGTTGG CAGCCTTGCC GAAAGATGAG AGCGCGGCAC TTCGTGAATG GGCTATCGCC AAAACAGCAG ACGAAATCAA AAGCCAGCCA CTCAATGGCA TGCCTGCCCA TGCCGCCCAG TTTTTGGGCA ACCCTGATGG CACAGTTCAG GAAAAAGAGC TTTACGACAC GTCACGGCGC AACTTCCTGG CGCTGGTTTT TTGCCTGATG GTCGGGACAT CGGCCTTGCC GCACATCCTG ATGCGCTATT ACACCGTGCC CAGCGTTCGT GAGGCACGGC AGTCCGTCAC CTGGTCACTG TTTTTCGTTT TTCTGCTGTA TTGCACCGCA CCTGCGCTGG CAGTGCTGGT GAAGTATGAA ATTTTTACCG TGCTGCTCGG TACACCCTTT GACCAACTGC CCGCATGGGT GAATGAGTGG AACAAGGTCG ATCCGGCGCT GCTGTCGGTG GTTGATGTCA ACAAAGACAA TGTCTTGCAA CTCAATGAAA TGACCATGGG TGGCGACATT GTGGTGCTGC TCACGCCTGA ACTGGCGGGG TTGCCTTACG TTGTTTCAGC GCTGGTGGCG GCAGGTGGAC TGGCCGCCGC ACTCTCTACC GCAGATGGAC TGCTGCTGGT CATTGCCAAT GCGCTGGGAC ATGACCTGTA CTACAAGATG ATTGATCCGA ATGCCTCAAC CGTGAGCCGT GTCACGCTGT CCAAAATACT GCTGCTCATC GTTGCCCTGC TGGCGGCTTA TGTAGCAGCC CAGAAACCGG CTGATATCCT GTTTCTGGTA TCGGCCGCTT TTTCATTTGC AGCGTCGTCG TTTTTTCCGG CGCTGAGCAT GGGTATTTTC TGGAAACGCG CTACCGGCAC GGCGGCGACT CTGGGAATGG TGTCGGGCCT GAGCGTGACG ACCTACTACA TGGTAACTAC CCAGCCGTGG CTACGCACCA CCTTCGGCAT TACCTCGCCG ATTCAACTCT GGTGGGGAAT TGATCCCATA TCAGCCGGTT TGTTCGGCGT GCCTGTTGGC TTTGCGGTGA TCATCCTGGT CAGTCTGGTG ACACGGCCGC CCAGCCAGGA CATGCAAGCG CTGCTGGAGT ACATCCGTTA TCCGGATCTG AAAGCCCATG ACAGGTCTTT TGCAGCACCA GCGCCGCGTC AGGGCAGGGC TGTTTCGCAT CAAGCTGGTG ACGGGCTATA A
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Protein sequence | MADFFGRREG VAHSKKQFKS QLDRVYRWFT LGFVVYVLLL GGLERLGMPH SWIGMTFLLS TIALYAGIGI MTRTTDAAEY YVAGRRVPAI YNGMAIGADW MSAASFLGLA GTLYLTGYSG LAFIMGWTGG YCLVALVLAP YLRKFGQFTI PDFLGERYGG HLPRFMGLLA AILCSFTYLV AQIYGVGLIT SYLTGIAFEL GIFLGVGGIL VCSFLGGMRA VTWTQVAQYI ILLVAYLIPV VWLSVKQTGI PVPQAVYGFQ LEKVTAKEKE LATDPKELEV RALFSKRAEV LAEKMKHPEL SMAADKLAAT KKLAALKAGN ASVAEVSAAG KALAALPKDE SAALREWAIA KTADEIKSQP LNGMPAHAAQ FLGNPDGTVQ EKELYDTSRR NFLALVFCLM VGTSALPHIL MRYYTVPSVR EARQSVTWSL FFVFLLYCTA PALAVLVKYE IFTVLLGTPF DQLPAWVNEW NKVDPALLSV VDVNKDNVLQ LNEMTMGGDI VVLLTPELAG LPYVVSALVA AGGLAAALST ADGLLLVIAN ALGHDLYYKM IDPNASTVSR VTLSKILLLI VALLAAYVAA QKPADILFLV SAAFSFAASS FFPALSMGIF WKRATGTAAT LGMVSGLSVT TYYMVTTQPW LRTTFGITSP IQLWWGIDPI SAGLFGVPVG FAVIILVSLV TRPPSQDMQA LLEYIRYPDL KAHDRSFAAP APRQGRAVSH QAGDGL
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