Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2383 |
Symbol | |
ID | 4688506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2511612 |
End bp | 2513768 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639835393 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_982611 |
Protein GI | 121605282 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit [COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCAA CGCCCACTCC TTTCAACGCC GCCAGTCTTG AAGCCTGGGC CAAATCGGCA GCCAAATCCG CGCCCAACGG TGACCTGGAC GCCCTGAACT GGCAAACGCC CGACGGCATC AGCGTCAAGC CGCTGTACAC CGCCGAGGAC ATCAAGGACT TGCCTTACAC CAACACCCTG CCGGGATTCG AGCCTTTTAT TCGCGGCCCG CAAGCCACGA TGTATGCGGT GCGCCCCTGG ACGATCCGCC AGTACGCGGG TTTTTCGACC GCCGAAGAGT CCAACGCTTT TTACCGCAAG GCGCTGGCGG CCGGCGGGCA GGGCGTATCA GTGGCGTTTG ACTTGGCCAC GCACCGGGGT TATGACAGCG ACCATCCGCG CGTGACGGGC GACGTTGGCA AGGCCGGCGT GGCGATTGAC AGCGTGGAGG ACATGAAAAT CCTGTTCGAC CAGATTCCGC TCGACAAGGT CAGCGTCTCC ATGACCATGA ACGGCGCCGT GCTGCCGGTG CTGGCAGGCT ATGTGGTGGC GGCGGAAGAG CAGGGCGTGA GCCAGGACAA ACTCAGCGGT ACCATCCAGA ACGATGTGCT TAAAGAGTTC ATGGTGCGCA ACACCTATAT CTATCCGCCA GCGCCCAGCA TGCGCATCAT TGGCGACATC ATCGAATACA CGGCGCAGAA CATGCCGAAA TTCAACTCGA TTTCCATCAG CGGCTACCAC ATGCAGGAAG CCGGCGCCAA CCAGGCACTC GAACTGGCCT TCACGCTGGC CGACGGCAAG GAGTACGTAA AAACCGCCCT GGGCAAGGGT CTGGACGTAG ATGGTTTTGC CGGCCGCCTG AGCTTTTTCT GGGCCGTCGG CATGAACTTC TACCTGGAAG TCGCCAAGAT GCGCGCCGCC AGATTGCTGT GGTGCCGCAT CATGAAGGGC TTTGACGCCA AGAACCCCAA GAGCCTGATG CTGCGCACCC ACTGCCAGAC CAGCGGCTGG AGCCTGACCG AGCAAGACCC GTACAACAAC GTGGTGCGCA CCACCATCGA AGCCATGGCG GCGGTGTTCG GCGGCACGCA AAGCCTGCAC ACCAATTCGT TCGACGAAGC GATTGCGCTG CCCACCGAAT TCTCGGCGCG CATTGCCCGC AACACCCAGC TCATCATCCA GGAAGAAACC CACATCACCA GCGTGATCGA CCCCTGGGCC GGCAGCTACA TGATGGAAAA GCTCACGCAG GACATGGCCG ACGCGGCCTG GACCCTCATC GAGGAAGTCG AAGCCATGGG CGGCATGGTC AAGGCCGTGG ACAGTGGCTG GGCCAAGCTC AAGATCGAAG CGGCTGCGGC TGAAAAGCAG GCCCGCATCG ACAGCGGCAA GGACGTGATC GTCGGCGTCA ACAAGTACAA GCTCAAAACC GAAGATGCCA TCGAATCGCG CGATATCGAC AACGTAGCGG TGCGCGATGG CCAGATTGAA CGCCTCAAGG CCATCCGGGC GCAGCGCGAT GGTGCTGCCG TTCAGGCCGC GCTCGATGCG TTGACGCAAG CAGCTGAAGG CAACAGCGGC AATTTGCTGG ACCTGTGCAT CAAGGCCGTG CGCCTGCGCG CCACGGTGGG CGAGGTCAGC GACGCACTCG AAAAGGTCTA TGGCCGCCAC CGCGCCGACA CCCAGAAGGT GAGTGGCGTG TATGCCGCCG CTTACGACTC GGCCGAAGGC TGGGAAACGC TCAAGAGCGA AATCAACGCC TTTGCCGAAA GCGAAGGCCG CCGCCCGCGC GTGATGATTT CAAAACTCGG CCAGGACGGC CATGACCGGG GAGCCAAGGT CGTGGCGACT GCATTTGCCG ACCTGGGTTT TGACGTGGAC ATGGGGCCGC TGTTCCAGAC GCCCGAAGAA TGCGCCCGTC AGGCAATTGA AAACGACGTG CATGCCGTGG GCGTGAGCAC GCTGGCCGCT GGTCACAAGA CGCTGGTTCC CGCCATCATT GCCGAGCTTC AGCGCCAGGG CGCCGATGAC ATCATCGTCT TCGTCGGCGG CGTGATTCCC CGGCAGGATT ACGAGATGCT GTATGACGCA GGCGTCAAGG GCATCTACGG ACCCGGCACG CCGATTCCGG CCAGCGCCAA GGATGTGCTG GAGCAGATCA GGGCTGCCCT GAAGTGA
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Protein sequence | MSSTPTPFNA ASLEAWAKSA AKSAPNGDLD ALNWQTPDGI SVKPLYTAED IKDLPYTNTL PGFEPFIRGP QATMYAVRPW TIRQYAGFST AEESNAFYRK ALAAGGQGVS VAFDLATHRG YDSDHPRVTG DVGKAGVAID SVEDMKILFD QIPLDKVSVS MTMNGAVLPV LAGYVVAAEE QGVSQDKLSG TIQNDVLKEF MVRNTYIYPP APSMRIIGDI IEYTAQNMPK FNSISISGYH MQEAGANQAL ELAFTLADGK EYVKTALGKG LDVDGFAGRL SFFWAVGMNF YLEVAKMRAA RLLWCRIMKG FDAKNPKSLM LRTHCQTSGW SLTEQDPYNN VVRTTIEAMA AVFGGTQSLH TNSFDEAIAL PTEFSARIAR NTQLIIQEET HITSVIDPWA GSYMMEKLTQ DMADAAWTLI EEVEAMGGMV KAVDSGWAKL KIEAAAAEKQ ARIDSGKDVI VGVNKYKLKT EDAIESRDID NVAVRDGQIE RLKAIRAQRD GAAVQAALDA LTQAAEGNSG NLLDLCIKAV RLRATVGEVS DALEKVYGRH RADTQKVSGV YAAAYDSAEG WETLKSEINA FAESEGRRPR VMISKLGQDG HDRGAKVVAT AFADLGFDVD MGPLFQTPEE CARQAIENDV HAVGVSTLAA GHKTLVPAII AELQRQGADD IIVFVGGVIP RQDYEMLYDA GVKGIYGPGT PIPASAKDVL EQIRAALK
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