Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2319 |
Symbol | |
ID | 4687898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2455767 |
End bp | 2456369 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639835330 |
Product | NifQ family protein |
Protein accession | YP_982548 |
Protein GI | 121605219 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00231718 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCCC ACGCCGTGTT GATGTCTTGC GCACCGGACG CGAACGATGC GGCCGCCCTG GCCCTGGCCG GGGTGCTGTC AGCCGCGTTC GAGCGCCACG GCCGCAGCCT GCTGCCCATG CCCGGCCTCG ATGCGACGGC CACGCGCTGG CTGCTGGCGC GCTGGTTTCC CGGCGCTGAT GCGGCGCTCG GGCTGGACTG GCACGCGCTG GCCGGCGCCG ACCGCATCGA GCCGCGCAGT GACGAAATCG AGGAAGTGGT CAGCCTGCTG CGCGAACACG CGGACCTGGC CGCCGGCCCC GCGCAAGCGT CGGACGCCAT TGCCTGGGCG ATGGCCTGCG CCAGCCTGGG CGACAACCAT TTGTGGCAAG ACCTCTGCCT GCCATCGCGC AACGAACTCT CGGCGCTGAT CGGCCACTGG TTTCCAGCGC TTGCCGCCAA GAACACGCAG CACATGAAGT GGAAGAAATT CTTCTACAAG CAGTTGTGCG AACGCGAGGA TATTTTGATT TGCAAGGCGC CGACCTGCGG CGTCTGCACG GATCATGCCG TGTGCTTTGG GCCGGAGGAT GCCCAGGCAA GCCAGGTAAT CGCGTTTCAT TGA
|
Protein sequence | MSAHAVLMSC APDANDAAAL ALAGVLSAAF ERHGRSLLPM PGLDATATRW LLARWFPGAD AALGLDWHAL AGADRIEPRS DEIEEVVSLL REHADLAAGP AQASDAIAWA MACASLGDNH LWQDLCLPSR NELSALIGHW FPALAAKNTQ HMKWKKFFYK QLCEREDILI CKAPTCGVCT DHAVCFGPED AQASQVIAFH
|
| |