Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2298 |
Symbol | |
ID | 4687208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2437771 |
End bp | 2438265 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639835309 |
Product | UspA domain-containing protein |
Protein accession | YP_982527 |
Protein GI | 121605198 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.178234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCTT CAACCCAGGA GCCCTCCATG CCCAGCTTTC ACCAGATTCT TGTGCCGGTT GACGGCAGTC CCCCTTCGGA AAAGGCGCTG GATGAAGCCA TCCGGCTGGC CCGGCTGAAC GGCGCGCGCC TGACGCTGCT TCATGTCGTC GATGAAATGG GCTACGTCAA CGGCTTCGAG TCGGCCGTGA ACTACCTCAA CGACATCATT CCACTCATGC GCGTGGCAGG CGAAAAACTG CTGGCGCACG ACCGGCAAAA GGCGCTTGAC CAGGGCGTGC AGGCGGACAG CGTGCTGATT GACGAGGGAC CGGGCCGCAT TTGCGAGCAT GTGGCCGAAC AGGCGGCGCT CGCCAAGGCT GACCTGATCG TCGTCGGCTC CCATGGCCGG CGCGGCATCG GGCGCCTGCT GCTGGGCAGT GATGCCGAGC AGATTGTGCG GCACGCGCCG GTGCCCGTGC TGGTGGTCCG GGCGCCTGCT GAAGCGAAGC CGTAG
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Protein sequence | MPSSTQEPSM PSFHQILVPV DGSPPSEKAL DEAIRLARLN GARLTLLHVV DEMGYVNGFE SAVNYLNDII PLMRVAGEKL LAHDRQKALD QGVQADSVLI DEGPGRICEH VAEQAALAKA DLIVVGSHGR RGIGRLLLGS DAEQIVRHAP VPVLVVRAPA EAKP
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