| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2264 |
|---|
| Symbol | |
|---|
| ID | 4689444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 2413945 |
|---|
| End bp | 2414508 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639835274 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_982493 |
|---|
| Protein GI | 121605164 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4197] Uncharacterized protein conserved in bacteria, prophage-related |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAT TACTTGCCTA CCTCAATAGC CTTAGCCCTG CTGAGCAAAA AGCGTTTGCT
TTGCGCTGTG GAACGACTGT TGGCTATTTG CGAAAAGCAG GTTCTACGGG GCAACGTATC
GGAGCCGAGT TGTGCATCAA TATTGAGCGT GAATCGCTCA AGTCTGTCGT GTGTGAGGTG
CTGCGTCCAG ATATTGATTG GGCATCTATT CGGCATACAG CGCCCGCTAG TCAAGCGCAA
GAAGCTATCA ATACAGTAGC AGAGGAAGCC AAAGCCGCTA TCCTTCATGT GGCCGACACG
GCCGAGGCTG AAATCAAGCA TGTTGCCGAG GCGCAAGCAG TTGTCAAAAC AGAGGTGAAA
GACGTTGACC CTCCCGTCAA GCTGCCGCCG CTCGCCTCGA CAGAGGTGGC TGACTCGCTG
GTGCTCGATG AGCGTCGCAA AGGCCCGCCC ACACGCCGCC TGAAAAAACA GCCTTTCATC
GGACCCGACC AGCGTGTCGG CCCACCGGAA CGGCGCGGCT TCAAGCTGCC TGAAGTCACG
GCCGCGCTGC CGAAGGGGGT TTGA
|
|---|
| Protein sequence | MEKLLAYLNS LSPAEQKAFA LRCGTTVGYL RKAGSTGQRI GAELCINIER ESLKSVVCEV
LRPDIDWASI RHTAPASQAQ EAINTVAEEA KAAILHVADT AEAEIKHVAE AQAVVKTEVK
DVDPPVKLPP LASTEVADSL VLDERRKGPP TRRLKKQPFI GPDQRVGPPE RRGFKLPEVT
AALPKGV
|
|---|
| |