| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2125 |
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| Symbol | |
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| ID | 4688294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2262263 |
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| End bp | 2263420 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639835136 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_982355 |
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| Protein GI | 121605026 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | [TIGR03207] cyclohexanecarboxyl-CoA dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00302332 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0292783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGA ACCCCTATAT CGACGAAGAC CTGCAGGCGC TGGCTGAGCA CGCACGCCGC
TTTGCCACCA AACGTGTCGC ACCCGGCTTC TTGGAGCGCG ACCAGACGCG CGTTCTGGAC
CGAGCGCTGC TGCGCGAGAT GGGTGAACTC GGGTTCATTT GTCCCGAGCT GCCCGAAGCG
TTCGGCGGCC AAGGCATGGG CTGCCTCGCT GCTGGCGTGA TCCACGAGGA AATCGCCCGC
GCCGACCTGA GCTTTTCCTA CCTGAACCTG CTGGCGTCGC TGAACGGCCA GATCCTGTCC
AAGTACGGCA ACCCCGAGGT GGTCAAGCCC TGGCTGCACA AACTCACCCA GGGCGAGGCC
ATTTGCGCCA TCGCCCTGAC CGAGCCGCGC GGCGGCTCCG ACGCGGCCAA CCTGCGCCTG
CGCATCGAGC GCGACGGCGA TGAATATGTC ATCAACGGCG AGAAGACCTC GATCTCGGCG
GCCGACCAGG CCGACATCAC GGTCGTGTTC GGCCGCACCG GCAAGCCCGA GGACGGCGCC
CATGGCGTGA CCGCGCTGCT GGTGCCGATG GACTTGCCCG GCCTGAGCAC CAACCGCTTC
GACTGCCATG GCCAGCGGGC CATCGGTCGC GGCTCGATCT TCTTCGAGAA CGTGCGCGTG
CCCGTCAGCC ACCGGCTGGG CGACGAGAAC AAGGGCTTCG TGCAGGTGAT GCACGGCTTT
GACTTCTCGC GCTCGCTGAT CGGCCTGCAG GTGCTGGCCG TGGCCCGCGT GGCCCTCGAT
GAAACCTGGG AATACATCAC CCAGCGCCAG GCCTTCGGCC AGCCGCTCTC AAGCTTCCAG
GGCGTGACGC ATCCGCTGGC CCAGTTCGAC ACCGAAGTCG AAGGCGCCCG CCTGCTGTGC
CTGCAGGGCC TGTGGCTCAA GGACAAGGGT TTGCCGCACA CGGCGGAAGC CGGCATGGCC
AAGTGGTGGG GACCCAAGCT GGCCTACGAC GTGATCCACC AGTGTCTGTT GTGCTTCGGC
CACGGCGGCT ACGACCGAGG CCTGATGGAG CAGCGCCTGC GCGACGTGCT GGGCTTCCAG
ATCGGCGACG GCACGGCCCA GATCATGAAG ACCGTCATTG CGCGCGTGCG CGCCGGACGC
AAGTTCGTGC CAGCCTGA
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| Protein sequence | MNPNPYIDED LQALAEHARR FATKRVAPGF LERDQTRVLD RALLREMGEL GFICPELPEA
FGGQGMGCLA AGVIHEEIAR ADLSFSYLNL LASLNGQILS KYGNPEVVKP WLHKLTQGEA
ICAIALTEPR GGSDAANLRL RIERDGDEYV INGEKTSISA ADQADITVVF GRTGKPEDGA
HGVTALLVPM DLPGLSTNRF DCHGQRAIGR GSIFFENVRV PVSHRLGDEN KGFVQVMHGF
DFSRSLIGLQ VLAVARVALD ETWEYITQRQ AFGQPLSSFQ GVTHPLAQFD TEVEGARLLC
LQGLWLKDKG LPHTAEAGMA KWWGPKLAYD VIHQCLLCFG HGGYDRGLME QRLRDVLGFQ
IGDGTAQIMK TVIARVRAGR KFVPA
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