Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2124 |
Symbol | |
ID | 4688299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2261463 |
End bp | 2262245 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639835135 |
Product | naphthoate synthase |
Protein accession | YP_982354 |
Protein GI | 121605025 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0447] Dihydroxynaphthoic acid synthase |
TIGRFAM ID | [TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase) [TIGR03210] 2-ketocyclohexanecarboxyl-CoA hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000363984 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0450036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTCG AAGACATCCT TTACGAAGTA CGCAACGGCG TGGCATGGAT CACGATCAAC CGGCCGGAGA AAATGAACTC GTTCCGGGGC CAGACCTGCG ACGAAATCAT CAAGGCGCTG AACAAGGCCG GCTATGACAA GGACGTGGGC GCCATCGTGC TGGCCGGCGC TGGCGACCGG GCGTTTTGCA CCGGCGGCGA CCAGTCGGCC CACAGCGGCA ACTATGACGG GCGCGGCACC ATCGGCCTGC CGATGGAAGA GTTGCACACC GCCCTGCGCG ACGTGCCCAA GCCGGTGATT GCCCGCGTGC AGGGTTTTGC CATCGGTGGC GGCAACGTGC TGTGCACGAT CTGCGACCTG ACGATCTGCT CCGACAAGGC CCAGTTCGGC CAGGTCGGCC CGAAGATGGG TTCGGTCGAT CCCGGCTACG GCACGGCGTT CCTGGCTAGA GTGGTCGGCG AGAAGAAGGC GCGCGAGATC TGGTACCTGA ACCGCCGCTA CTCGGGCGCC GAGGCCGTCG CCATGGGCCT GGCCAATATC TGCGTGCCGC ACGAGGAACT CGACGCCACC GTCCAAAAGT GGGGCGAGGA AATCTGCGAG CGCAGCCCGA CGGCCCTGGC CATTGCCAAG CGCAGCTTCA ACGCCGACAC CGCCCACCAG AGCGGCATCG CCGGACTGGG CATGTACGCG CTCAAGCTGT ATTACGACAC CGAAGAGTCG CGTGAAGGCG TCAATGCGCT GAAGGAAAAG CGCAAGCCCG ACTTCCGCAA GTTCGCCAAG TAA
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Protein sequence | MTFEDILYEV RNGVAWITIN RPEKMNSFRG QTCDEIIKAL NKAGYDKDVG AIVLAGAGDR AFCTGGDQSA HSGNYDGRGT IGLPMEELHT ALRDVPKPVI ARVQGFAIGG GNVLCTICDL TICSDKAQFG QVGPKMGSVD PGYGTAFLAR VVGEKKAREI WYLNRRYSGA EAVAMGLANI CVPHEELDAT VQKWGEEICE RSPTALAIAK RSFNADTAHQ SGIAGLGMYA LKLYYDTEES REGVNALKEK RKPDFRKFAK
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