Gene Pnap_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2122 
Symbol 
ID4688313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2259895 
End bp2260404 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content60% 
IMG OID639835133 
ProductMarR family transcriptional regulator 
Protein accessionYP_982352 
Protein GI121605023 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000649422 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.111554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTACC CTAATGAAAA TGCTGTTTCT GTGCGGACGG AACTGGCCAA CAGGTTGTTC 
TTTCGCTTGT ATCAATGTAC CAATATGTTG CATAAAACCG GGACGCGCGC GGTAGAGGCC
GAAGGCCTGA CCACGCAGCA GTGGGCGGTG CTGGGCGCCT TGTCGCGGCC GGAAGCCGAG
GGCGGCATGA GCGTCGGGGA TCTGGCCCGC TACCTGATGG TGAGCCGCCA GAACCTGGCG
GGGCTGATCA GCCGGATGGA GCGCGACGGG CATATTTGCA CTGCCCCCGA TGGGCGCGAC
CGCCGTTCGC GCCTGGTGAC GATGACGGCG TCAGGCCGGG AGGTCTGGGC CGTGAAGGCG
CAGCCCAAGA TTCATGACTA TTACGAGCAG GCACTGGAAG GTTTTTCGAC CAACGACCTC
ACCCATACGC TGCACTACCT GCTCAAGCTG CTGGAGAACA TGAAGCGTCT TGATGACGAC
AAAGAACCCA CCCAGACGAA TGAACCCTGA
 
Protein sequence
MVYPNENAVS VRTELANRLF FRLYQCTNML HKTGTRAVEA EGLTTQQWAV LGALSRPEAE 
GGMSVGDLAR YLMVSRQNLA GLISRMERDG HICTAPDGRD RRSRLVTMTA SGREVWAVKA
QPKIHDYYEQ ALEGFSTNDL THTLHYLLKL LENMKRLDDD KEPTQTNEP