Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2107 |
Symbol | |
ID | 4688716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2246034 |
End bp | 2247215 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639835118 |
Product | benzoate transporter |
Protein accession | YP_982337 |
Protein GI | 121605008 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
TIGRFAM ID | [TIGR00843] benzoate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.07884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.334527 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG ACTTTTCCCT GTCAGCCGTC ACGGCTGGAT TCCTGGCCGT GCTGATTTCC TATGCCGGTC CGCTGGTGAT ATTTTTCCAG GCCGGCCAAA GTGCCCATGT CTCCGCGGAA ATGATGTCGT CCTGGGTCTG GGCCATTTCA ATCGGGGCAG GGGTGTCGGG CATCTTGCTG AGCTGGTGGC TCAAGGTGCC GGTCGTGACG GCCTGGTCCG CACCGGGCAC GGCCTTGCTG GTGACCTTGT TCCCCGCCAT CACGCTCGGG CAGGCCGTCG GGGCTTACCT GGTGTCGGCG GTCATTATTT TCATCATTGG CGTGTCCGGT TATTTTGACA AGCTGGTGCA GGCCATCCCC AAAGGCATTG CCAGCGCCAT GATGGCGGGC ATTTTGTTCC AGTTTGGCGT CGGCGCGTTT CAAGCGGTCA CAGCGATGCC GCTCATCACC TTTTGCATGA TGGGCACTTA TTTGCTCTTC AGGCGCTTGC TGCCGCGCTA TTGCCTGGTG ATTTTGCTGG TGATCAGTCT GGTGCTGGCG GTGGCCCTGG AGGGCGTGAG CCTGGCCGGC GTGACATTCA CTCTGGCCAG CCCGGTGTTC ATCACACCCG AGTGGACCTG GGGCGCAACC CTGAGCCTGG CGCTGCCGCT GGTGCTGGTC AGCGTGACGG GGCAGTTCTT GCCGGGCATG GCCATCTTGC GCAGTTCGGG CTACAGCACG CCGGCCCGTC CCATCATCAT CACGACCAGC CTGGCCTCGC TGGGCGTGGC ATTTTTCGGC GGCATCACGA TTGTGATTGC GGCCATCACG GCGGCGCTTT GCACTGGCAA GGACGCGCAT GAAGACGCCA CAAAACGCTA TGTGGCAGGC ATTGCCAACG GCGTGTTTTA CCTGGTGGGC GGCTGCTTTG CCGGCACCAT CATCTTGTTT TTTGCAGCCT TGCCCAAAGC GCTGATCGCG GTGCTGGCCG GACTGGCCCT GGTGGGCGCG ATTGGGGGTA GTCTGGCCGG TGCAATGAAC GAAGCCGATC ACCGGGAGGC CTCGATCATC ACCTTCTTGG CCACAGCGTC GGGCATGACG TTCTGGGGCC TGGGGTCGGC GTTCTGGGGA GTGGTCATTG GCGCGCTAGC CTATTTGCTG CTGCATAAGC AATGGTTTCT TCCCGCGAAG GCGAGGCTTT GA
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Protein sequence | MKKDFSLSAV TAGFLAVLIS YAGPLVIFFQ AGQSAHVSAE MMSSWVWAIS IGAGVSGILL SWWLKVPVVT AWSAPGTALL VTLFPAITLG QAVGAYLVSA VIIFIIGVSG YFDKLVQAIP KGIASAMMAG ILFQFGVGAF QAVTAMPLIT FCMMGTYLLF RRLLPRYCLV ILLVISLVLA VALEGVSLAG VTFTLASPVF ITPEWTWGAT LSLALPLVLV SVTGQFLPGM AILRSSGYST PARPIIITTS LASLGVAFFG GITIVIAAIT AALCTGKDAH EDATKRYVAG IANGVFYLVG GCFAGTIILF FAALPKALIA VLAGLALVGA IGGSLAGAMN EADHREASII TFLATASGMT FWGLGSAFWG VVIGALAYLL LHKQWFLPAK ARL
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