| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2008 |
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| Symbol | |
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| ID | 4688872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2131667 |
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| End bp | 2133490 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639835016 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_982238 |
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| Protein GI | 121604909 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.511019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCATA AACAGATCCG TAACATCGCC ATCATTGCCC ACGTTGACCA TGGTAAGACC
ACCATGGTTG ACCAATTGCT GCGCCAGTCC GGCACCTTCG CCGATCACGA AAAGGTTGTC
GATACCGTGA TGGACAACAA CGCCATCGAA AAAGAGCGTG GCATCACGAT TCTGGCCAAG
AACTGCGCCG TGACCTGGGA AGGCACGCAC ATCAACATCG TCGATACCCC GGGCCACGCC
GACTTCGGCG GTGAAGTCGA ACGCGCCCTG TCCATGGTCG ATGGCGTGGT GTTGCTGATC
GACGCGCAGG AAGGCCCCAT GCCCCAGACC CGCTTCGTGA CCAAGAAGGC GCTGGCCCTG
GGCCTCAAGC CCATCGTGGT GGTGAACAAG GTGGACAAGC CGGGCGCCAA TCCCGACAAG
GTGATCAACG CCACGTTCGA TTTGTTCGAC AAGCTCGGCG CCACCGATGA ACAGCTCGAT
TTCCCCGTGG TCTATGCCTC GGGCATCAAC GGCTGGTCGT CGCTGGAAGA AGGCGCGCAG
GGCGAGCAGT GGGGTCCCGA CATGTCGGCC CTGTTCAACA CCGTGCTCAA GCATGTGCCC
GCCCAGAAGG GCGACCCAGA AGCGCCGCTG CAGCTGCAGA TTTCCGCACT CGACTTTTCG
ACCTTCGTGG GCCGCATCGG CGTGGGCCGC ATCAGCCAGG GCACGATCAG GCCGATGATG
GACGTGGTCG TGATGGAAGG CCCGGACGGC AAGGCTGTCA AGGGCCGCAT TAATCAGGTG
CTGACCTTCC AGGGCCTGGA GCGCGTGCAG GCGACCGAAG CCGGCCCCGG CGAAATCGTG
CTGATCAACG GCCTGACCGA CATCGGCATT GGCGTGACCA TCACCGACCC GGCCAATCCG
ATGCCGCTGC CGATGCTCAA GGTCGATGAG CCGACGCTGA CCATGAACTT CTGCGTCAAC
ACCAGCCCGC TGGCCGGCCG TGAAGGCAAG TACGTCACCA GCCGCCAGAT CTGGGACCGC
CTGCAAAAGG AACTGCAGCA CAACGTGGCT TTGCGCGTCA ATGAAACCGA CGAAGAAGGC
ATCTTTGAAG TCATGGGCCG GGGCGAGTTG CACCTGACCA TCCTGCTGGA AAACATGCGC
CGCGAAGGCT TCGAGATGGC TGTTTCCAAG CCGCGTGTGC TGCTCAAGGA TGTGAATGGC
GTCAAGCATG AGCCCATCGA GCTGGTGACC GCCGACATCG AAGAGCAGCA CCAGGGCGGC
GTGATGCAGG CGCTGGGCGA ACGCAAGGGC GAACTGGTCA ACATGGAGCC GGACGGCCGT
GGCCGTGTGC GCCTCGAATA CCGCATTCCG GCGCGTGGCC TGATCGGTTT CACCAACGAA
TTCCTGAATT TGACGCGCGG CTCCGGCCTG ATCGCCAATA TTTTCGACTG CTATGAGCCG
CACAAGGGCG ACATCGGCGG ACGCAAGAAC GGCGTGCTGA TCTCCATGGA TGCCGGTGAA
ATCTTCACCT ACGCGCTGGG CAAGCTCGAT GACCGTGGCC GCATGTTCGT CAAGGCCAAC
GATCCGGTGT ATGAAGGCAT GATCGTCGGC ATTCACAGCC GCGACAACGA TCTGGTGGTC
AACGCCACGC GCACCAAGCA GTTGACCAAC TTCCGCGTGT CCGGCAAGGA AGACGCGATC
AAGATCACGC CGCCGATTGA ATGCACGCTG GAATACGGCG TCGAGTTCAT CGAGGACGAT
GAACTGGTCG AAATCACGCC CAAGTCGATT CGCCTGCGCA AGCGCTACTT GACCGAGAGC
GAGCGCAAAC GCGCTGGCCG CTGA
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| Protein sequence | MSHKQIRNIA IIAHVDHGKT TMVDQLLRQS GTFADHEKVV DTVMDNNAIE KERGITILAK
NCAVTWEGTH INIVDTPGHA DFGGEVERAL SMVDGVVLLI DAQEGPMPQT RFVTKKALAL
GLKPIVVVNK VDKPGANPDK VINATFDLFD KLGATDEQLD FPVVYASGIN GWSSLEEGAQ
GEQWGPDMSA LFNTVLKHVP AQKGDPEAPL QLQISALDFS TFVGRIGVGR ISQGTIRPMM
DVVVMEGPDG KAVKGRINQV LTFQGLERVQ ATEAGPGEIV LINGLTDIGI GVTITDPANP
MPLPMLKVDE PTLTMNFCVN TSPLAGREGK YVTSRQIWDR LQKELQHNVA LRVNETDEEG
IFEVMGRGEL HLTILLENMR REGFEMAVSK PRVLLKDVNG VKHEPIELVT ADIEEQHQGG
VMQALGERKG ELVNMEPDGR GRVRLEYRIP ARGLIGFTNE FLNLTRGSGL IANIFDCYEP
HKGDIGGRKN GVLISMDAGE IFTYALGKLD DRGRMFVKAN DPVYEGMIVG IHSRDNDLVV
NATRTKQLTN FRVSGKEDAI KITPPIECTL EYGVEFIEDD ELVEITPKSI RLRKRYLTES
ERKRAGR
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