Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2004 |
Symbol | |
ID | 4688620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2128461 |
End bp | 2128907 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639835012 |
Product | cyclase/dehydrase |
Protein accession | YP_982234 |
Protein GI | 121604905 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0398865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.691542 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCG TTCACAAGTC CGTTCTTATC TGGTACAGCG CAGCTGAAAT GTTTGCCCTG GTCACCGATG TTGTCAGCTA TCCGCAGTTT TTGCCGTGGT GCGACCGTGC ATCGGTGCAG GAAGAAAATG CGCATGGCAT GGTTGCCAAG GTCGGTATTT CATTTGCGGG CCTCAAGCAA AGCTTTACGA CCCGAAACAC GCATGAACCC GACCGCAAGG TCAATCTGGA ACTGGTCGAT GGGCCTTTTT CCAGGCTGGA AGGACATTGG TTCTTTCTTC CCCTGGGCGA CGGCAGTCAG CGCGCCTGCA AGGTCGAGTT CACCTTGTGT TATGCCTTCG ACAATGGAAT GCTGGCTGCG CTGGTCGGCC CGGTGTTCGA CAAGATAGCT GGCAGCCTGG TCGATGCCTT TGTCAAAAGA GCTTCCGTTG TTTATGGTGA AACCTGA
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Protein sequence | MKTVHKSVLI WYSAAEMFAL VTDVVSYPQF LPWCDRASVQ EENAHGMVAK VGISFAGLKQ SFTTRNTHEP DRKVNLELVD GPFSRLEGHW FFLPLGDGSQ RACKVEFTLC YAFDNGMLAA LVGPVFDKIA GSLVDAFVKR ASVVYGET
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