Gene Pnap_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2004 
Symbol 
ID4688620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2128461 
End bp2128907 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content54% 
IMG OID639835012 
Productcyclase/dehydrase 
Protein accessionYP_982234 
Protein GI121604905 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0398865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.691542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG TTCACAAGTC CGTTCTTATC TGGTACAGCG CAGCTGAAAT GTTTGCCCTG 
GTCACCGATG TTGTCAGCTA TCCGCAGTTT TTGCCGTGGT GCGACCGTGC ATCGGTGCAG
GAAGAAAATG CGCATGGCAT GGTTGCCAAG GTCGGTATTT CATTTGCGGG CCTCAAGCAA
AGCTTTACGA CCCGAAACAC GCATGAACCC GACCGCAAGG TCAATCTGGA ACTGGTCGAT
GGGCCTTTTT CCAGGCTGGA AGGACATTGG TTCTTTCTTC CCCTGGGCGA CGGCAGTCAG
CGCGCCTGCA AGGTCGAGTT CACCTTGTGT TATGCCTTCG ACAATGGAAT GCTGGCTGCG
CTGGTCGGCC CGGTGTTCGA CAAGATAGCT GGCAGCCTGG TCGATGCCTT TGTCAAAAGA
GCTTCCGTTG TTTATGGTGA AACCTGA
 
Protein sequence
MKTVHKSVLI WYSAAEMFAL VTDVVSYPQF LPWCDRASVQ EENAHGMVAK VGISFAGLKQ 
SFTTRNTHEP DRKVNLELVD GPFSRLEGHW FFLPLGDGSQ RACKVEFTLC YAFDNGMLAA
LVGPVFDKIA GSLVDAFVKR ASVVYGET