Gene Pnap_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1994 
Symbol 
ID4688722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2119577 
End bp2120503 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content57% 
IMG OID639835002 
Productputative adenylate/guanylate cyclase 
Protein accessionYP_982224 
Protein GI121604895 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.646179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.377958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAC TTACCGTCGT TTTTGCGGAC CTTACCGGAA GCACTGCCCT TTTTGAGGCG 
CTGGGCAATG CCAAGGCAAC CCAGGCAATC ACACGGTTGA CGCAGTGGAT AGGCCAAGTC
TGTAAAAACC ATGGCGGGCA CGTCGTGAAA TACCTTGGAG ACGGTGTTCT CATCCTGTTT
CAGGAGAGCC GTCATGCCGT AGAGGCGTCC AGTGAGCTTC ATCGGGTGCA TCATGACCGA
ATCCGCAATT GGCCCGATGC CCTCAAAATG CGGCTTCAGG TAGGCATGGC CCGTGGCGAT
GTCGTCGAGC AGAGCGGCGA CTGTTATGGC GATGCTGTCA ATCTGGCTTC GCGCCTGAGC
GACCTTTCTG GTTCTGAGCA GACACTGGCA AGTGAAGCCG TGATCCGGCA ACTGCCTGAC
GACTTCATGG TGCGCGCGCG CTGTCTGGGG CCCATGGTCA TCCGGGGTCG CACGGAGTTG
TGCGTTGTGC ATCGTATTGA ATGGCAGGAC GAGGTGCTTT CTGAACTTTT CACGATGCCA
GCCAGCCTGA TGGCTTTGCC TCTGGACCGG CGCGACGAGG CGAAGCCTGT CTGTATCGAG
TTGTCCTGGC TCGACATCAG CGCCAGGTTT ACCGCCGCCG CGCTTCCTGT GTTTCTTGGC
CGTGATGCCG ATGCCCAGTT CGTGGTGCAA GACCCCAGGG TTTCGCGAAA ACATGCCCGG
ATCGAATGGC GTTCCGGCAA GTTCTATCTT GAAGATCTCA GCAGCTATGG AACCTGGGTG
CGGTTTTCCG ACAGCAAGGC TGTCGTGGCT TTGCGTCGCC AGGAATGTGT GTTGATGCTG
GATGGAGAAA TTGCACTGGG CGCTTCTTTT GAAGACTTCA CCGTACCTAC GGTCACGTTC
AGGTTTCTTG AGGAAACAGC CGCATAG
 
Protein sequence
MAELTVVFAD LTGSTALFEA LGNAKATQAI TRLTQWIGQV CKNHGGHVVK YLGDGVLILF 
QESRHAVEAS SELHRVHHDR IRNWPDALKM RLQVGMARGD VVEQSGDCYG DAVNLASRLS
DLSGSEQTLA SEAVIRQLPD DFMVRARCLG PMVIRGRTEL CVVHRIEWQD EVLSELFTMP
ASLMALPLDR RDEAKPVCIE LSWLDISARF TAAALPVFLG RDADAQFVVQ DPRVSRKHAR
IEWRSGKFYL EDLSSYGTWV RFSDSKAVVA LRRQECVLML DGEIALGASF EDFTVPTVTF
RFLEETAA