| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1956 |
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| Symbol | |
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| ID | 4687044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2078603 |
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| End bp | 2080063 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639834964 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_982186 |
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| Protein GI | 121604857 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.696783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCT CTGATTCACT GCCCAGCATC CTCGTGGTGG ACGACGAAGT GCATTCGCAG
GCTGCCATGC GGCGAACGCT CGATGAAGAC TTCACCGTGT TCACGGCCAG CGATGCCGAC
GAGGCCAGAG CCCTGCTGGA GCGCCAGGCG GTCAGCGTGA TCTTGTGTGA CCAGCGCATG
CCCGGGCTGA CCGGCGTGGC TTTTCTGAAA GAGGTGCGCG AGCGCTGGCC GGACACGGTG
CGCATCGTGA TTTCCGGCTA TACCGACACC GAAGACATCA TCGCCGGCAT CAATGACGCA
GGCATCTACC AGTACATTTT GAAGCCCTGG GTGCCGGACC ACCTGCTGCA AACCGTGCGC
ACAGCCGCCG AGGCGCAAAC CCTGCAGCGC AGCATGAACC AGCTGGACCT GGAGCTGCGC
ACCAGCACGC CGGTGCTGCG CCAGCGGGTC GCCCACAAGC TGGCGCAGGC GCGCAGTGTC
TTTGACTTTG AGCGTATCGA ACGCGGCTCG AACAGTCCCT TGAATGCGGT CTGCAGCATG
GCCGAGCGGG TGGCGCGCTA TGACCTGAGC GTGCTGGTGC TGGGCGAGTC CGGCAGCGGC
AAGGAGCTGA TCGCTCGCGC CATCCACTAC GCCAGTCCGC GCGGAGGCGG CCCGTTCGTG
GTGGAAAACT GCGCGGCCAT TCCTGACACA TTGCTGGAGT CCGAACTGTT CGGCCACAAG
CGCGGCTCCT TCACCGGCGC CTATGAAGAT CGCCCGGGAC TCTTTCAGCG GGCCAACGGC
GGCACCGTTT TCCTGGACGA GATTGGCGAG ACCTCCCCGG CTTTTCAGGT GCGGGTGCTG
CGGGTGCTGC AGGAAGGCGA GGTGCGGCCG GTGGGGGCGG CACGTCCCGT TCCGGTCAAT
GTCCGGGTGA TTGCCGCCAC CCACCGCGAC CTGGAGCAGC GGGTGCATGA GGGCCTGTTC
CGCAAAGACC TGTACTACCG CCTGGCCGGC GTGTCGATCA CCGTGCCGCC GCTGCGCGAG
CGCGCGGGAG ACATCGCGCC GATTGCCCGG CGCCTGGTGC GCGATGTCGG CGCCGAGCTT
GGCCGGCCGG GCGCCACGCT CAATGACGAG GCCTTGGCCT GCCTGATGGG CTACCCGTGG
CCGGGCAATA TCCGGGAACT GCGCAATGAG ATTGCCCGCG CCGTGGCCCT GAGCGACGGG
GACGAGATTC AGGCGCAGAC CTTTTCACTG CGCGTGCTGC ACGGCCAGGC CGGTCTGGCC
GCCAGCGGCC AGGCCGCCGA CCAGGCGCTG TCGCTGCCGA GCAGCGGCAC CCTGAGCGAG
CGGCTCGATG CGATTGAAAC CATGGTGCTG CGCGAAACCC TGCTGCGCCA CCGCTGGAAC
AAGACCCACG CCGCCAGGGA GCTGGGCCTG TCGCGGGTCG GTCTGCGCGG CAAAATGGTC
CGTTTCGGAC TGGAGGGCTA A
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| Protein sequence | MNLSDSLPSI LVVDDEVHSQ AAMRRTLDED FTVFTASDAD EARALLERQA VSVILCDQRM
PGLTGVAFLK EVRERWPDTV RIVISGYTDT EDIIAGINDA GIYQYILKPW VPDHLLQTVR
TAAEAQTLQR SMNQLDLELR TSTPVLRQRV AHKLAQARSV FDFERIERGS NSPLNAVCSM
AERVARYDLS VLVLGESGSG KELIARAIHY ASPRGGGPFV VENCAAIPDT LLESELFGHK
RGSFTGAYED RPGLFQRANG GTVFLDEIGE TSPAFQVRVL RVLQEGEVRP VGAARPVPVN
VRVIAATHRD LEQRVHEGLF RKDLYYRLAG VSITVPPLRE RAGDIAPIAR RLVRDVGAEL
GRPGATLNDE ALACLMGYPW PGNIRELRNE IARAVALSDG DEIQAQTFSL RVLHGQAGLA
ASGQAADQAL SLPSSGTLSE RLDAIETMVL RETLLRHRWN KTHAARELGL SRVGLRGKMV
RFGLEG
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