Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1924 |
Symbol | |
ID | 4686332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2045673 |
End bp | 2046107 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639834933 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_982155 |
Protein GI | 121604826 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.645056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTTC GTCCTCATGC GCGCGTCGAG CCGGAAATCA ACCTGATTCC GTTCATCGAT GTGCTGCTGG TGGTGCTGAT CTTTTTGATG CTTTCGACCA CCTACAGCAA ATTCACCGAA CTCCAGGTCA AGCTGCCGGC CGCCGATGCG GAGCAACTGC GCGACTACCC CAGGGAAGTG GTCGTTGCCG TCAGCAGCGA TGGCCGCTAC ATGGTCAATA AAACCTTGGT CGATGGGCGG GGAATCGAAG TGCTGGGCGC AGCACTCACC CTGGCAGCCA AGGCCGGCAA GGAGAGCGTC ATCATCATCA GCGCCGATGC CAGCGCCACC CACCAGGCCG TCATCACCGT GATGGAGGCG GCCCGGCGCC AGGGCCTGAC GCAGATCACT TTTGCCACCC AGAGTTCGAG TTCGCTGCAG GCAGGCGTGA AGTAA
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Protein sequence | MNFRPHARVE PEINLIPFID VLLVVLIFLM LSTTYSKFTE LQVKLPAADA EQLRDYPREV VVAVSSDGRY MVNKTLVDGR GIEVLGAALT LAAKAGKESV IIISADASAT HQAVITVMEA ARRQGLTQIT FATQSSSSLQ AGVK
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