Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1915 |
Symbol | |
ID | 4687060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2037758 |
End bp | 2039320 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639834924 |
Product | 3-hydroxy-acyl-CoA dehydrogenase |
Protein accession | YP_982146 |
Protein GI | 121604817 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCCC ATCCATCAAC CATCGGCCTT CACCCAACAA TGCACACAAC AATTTTTAAA ACGGTCGGCA TTGTCGGCAC CGGGGCCATG GGGCGCGGCA TCGCCCAGAT CGCGGCCCAG GCCGGCAGCA TCGTCAAGCT GATGGATGCC CAGGCGGGCG CCGCTGAAAA AGCCCATCAA GCCCTCTTCA GCCAGTGGGA CAAGCTGGTC GAAAAAGAGC GGATTTCCCC TGACGCAGCC CACGCGCACA AGGCCAGGCT GCGGGTGGCC GGCACGCTGG CTGACCTGTC GGACTGCGAC CTGGTGATTG AAGCCATCGT CGAGCGGCTG GACATCAAGA AAGCGCTGTT CGCCCAGCTT GAAGCCATCG TGCCGGCGCA AGCCGTGCTG GCAAGCAATA CGTCTTCGCT GTCGGTGACC GCGATTGCCG CAGCCCTCAA GCACCCCGAA CGCTTTGCCG GCTATCACTT CTTCAACCCG GTTCCGCTGA TGAAAGTCGT CGAAATCATC GCCGGGCTGA AAACCGGCGC CGACACTTGC CACGGTTTGA GCCAGTACGC CCGCCAGATG GGCCACACGC CGGTGCAGGC GCAGGACACG CCGGGCTTCA TCGTCAACCA CGCCGGGCGC GGCTACGGCA CCGAGGCGCT GCGCATCGTC AGCGAAGGCA TTGCCGACTT CGCCACCATC GACCGCATCC TGCGCGACCA GGCCGGCTTC AAGCTCGGAC CGTTCGAGTT GATGGACCTG ACCGGACTCG ATGTTTCGCA TCCGGTGATG GAATCGATTT ACCACCAGTA TTACGAGGAA GACCGCTACC GCCCCAGCGT CATCACCGCG CAGCGCCTGG CCGGCGGACT GCTGGGCCGC AAGACCGGCG AAGGCTTTTA CCGCCATGAA GGCGGCGTGG CACAGGTTCC GGCCGAAGCG CCGCCTCCCG TTGTGGCCGA AATGCCGCCG GTCTGGGTGT CGCCTAGAGC GGCCCGGCGT TCGGAATTGC TGCAATTACT CAAGAACCTG GGCGCCCACA TCGAAACCGG CCAGTCGCCG TCCCCGCAGG CGCTGACGCT GGTCGCGCCG CTGGGCTTTG ACATCACGAC GGTGGCCGTG GTCGAGCGGC TGGACCCGGC GCGCACCGTC GGCATCGACA TGCTGATCGA TGACGCCACC ACCAAACGCC GCGTCCTGGC GACCAACCCG GCCACGCGCA GCGACATGCG CGATGCGGCG CATGCGCTGT TTGCCCGCGA CGGCAAGGCG GTCAGCGTGA TCCGCGACAG CGGCGGCTTT GTCACGCAGC GCGTCGTCGC CACCATCGTC AACATTGCCA GCGACATCTG CCAGCAGGGC GTCTGCAGCC CCAAAGACCT GGAAACCGCC GTCACGCTGG GCCTTGGCTA TCCGATGGGA CCGCTGGCCA TGGGCGACCG TTATGGTCCG ACCAATGTGC TCGAAGTGCT GTTCAACATG CAAACCGTGT ATGGCGACCA GCGCTACCGC CCTTCACCGT GGCTGCGCCG CCGGGGCGCG ATTGGCCTGA GCCTGATGCA CGAGGAAAGC TGA
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Protein sequence | MPSHPSTIGL HPTMHTTIFK TVGIVGTGAM GRGIAQIAAQ AGSIVKLMDA QAGAAEKAHQ ALFSQWDKLV EKERISPDAA HAHKARLRVA GTLADLSDCD LVIEAIVERL DIKKALFAQL EAIVPAQAVL ASNTSSLSVT AIAAALKHPE RFAGYHFFNP VPLMKVVEII AGLKTGADTC HGLSQYARQM GHTPVQAQDT PGFIVNHAGR GYGTEALRIV SEGIADFATI DRILRDQAGF KLGPFELMDL TGLDVSHPVM ESIYHQYYEE DRYRPSVITA QRLAGGLLGR KTGEGFYRHE GGVAQVPAEA PPPVVAEMPP VWVSPRAARR SELLQLLKNL GAHIETGQSP SPQALTLVAP LGFDITTVAV VERLDPARTV GIDMLIDDAT TKRRVLATNP ATRSDMRDAA HALFARDGKA VSVIRDSGGF VTQRVVATIV NIASDICQQG VCSPKDLETA VTLGLGYPMG PLAMGDRYGP TNVLEVLFNM QTVYGDQRYR PSPWLRRRGA IGLSLMHEES
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