| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1864 |
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| Symbol | |
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| ID | 4686410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1987902 |
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| End bp | 1988726 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639834871 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_982095 |
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| Protein GI | 121604766 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCCA CCAAATTATC GGTTGTTCCG AAAGCATCGC CGCTTGTAGC CGCCGTTTGC
GCATTGGTCG TTGTTGTGTC CGGCTGCTCA AGCACTCCGG CGCCCGACAA GACTGCAACA
TGGAGTCCGA ACAAAATTTA CGCCGAAGCC AAGGATGAAG CGGGCTCCGG CGCCTATGAC
AAGGCGATTC CTCTTTACGA AAAGCTCGAA GGCCGCGCAG CCGGAACGCC TCTGGCGCAG
CAAGCGCAAC TCGACAAGGC GTATGCCCAG TATAAAGGGG GCGAACAGGC CCAGGCGCTC
GCGACGCTGA ACAGGTTCAT GAAACTTCAC CCAGCCAGCC CGGCCATGGA CTATGCCCTT
TACCTGAAAG GGCTGGTGAA CTTCAATGAC AACCTGGGCA TCTTTGGATC CATTTCGCGC
CAGGATCTGT CCGAGCGTGA CCAGAATGCG GCGAAAGAAT CCTTTGAATC ATTCAAGGAA
CTGGTGGCGC GGTTTCCTGA TTCGCGCTAT GCGCCCGATG CACGCTTGCG CATGAACTAC
ATTGTCAATT CACTGGCAAA GTCCGAAGTT CATGTCGCCC GCTATTACTA TTCGCGCGGG
GCTTACGTGG CGGCCATCAA CCGTGCGCAA AGTGCCATTG CCGACTATCG CGACGTTCCA
GCGCTTGAAG AAGCCACCTT CATTCTCTAC AAATCTTATG ATGCCCTCGG CATGACCGAG
TTGCGTGATG ACATGCGCCG CATCATGGAC AAGAGCTATC CGCAAAGCCA GTACATGAGC
AAAGGCTTCA GGACTGCGGA CAATCCGTGG TACAAGTTCT GGTAA
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| Protein sequence | MFSTKLSVVP KASPLVAAVC ALVVVVSGCS STPAPDKTAT WSPNKIYAEA KDEAGSGAYD
KAIPLYEKLE GRAAGTPLAQ QAQLDKAYAQ YKGGEQAQAL ATLNRFMKLH PASPAMDYAL
YLKGLVNFND NLGIFGSISR QDLSERDQNA AKESFESFKE LVARFPDSRY APDARLRMNY
IVNSLAKSEV HVARYYYSRG AYVAAINRAQ SAIADYRDVP ALEEATFILY KSYDALGMTE
LRDDMRRIMD KSYPQSQYMS KGFRTADNPW YKFW
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