| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1856 |
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| Symbol | sucA |
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| ID | 4687959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1977412 |
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| End bp | 1980303 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639834863 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_982087 |
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| Protein GI | 121604758 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.61724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.555418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAA ACTCGCAGTC ACCTGCGTCT GTCTATACAG CCTACCAAGG CAATACCTAT
CTTTTCGGCG GCAATGCGCC CTATGTCGAA GAGATGTATG AAAATTATCT TGCCAATCCT
GGCAGCGTCA CCGACAACTG GCGTGAGTAT TTCGACGCGC TGCAGCATGT CGCGGCAACG
GACGGCAGCA ATGCGAAAGA CGTTCCGCAT TTGCCCGTCG TCAATGCCTT TGCCGAACGC
GCCAAGCAGG GTCAAACCAA AGTCGTGGTC GCCAGCGGCG CGGATTCTGA AATGGGCCGC
AAGCGCACAT CCGTCCAGCA ACTGATCGCC GCTTATCGCA ATGTCGGCGC ACGCTGGGCC
GATCTTGATC CGCTCAAGCG CGCCGAACGA GACAATATTC CTGAACTGGA TCCGTCTTTT
TACGGTTTCA CCGATGCCGA CCAGGAGATC GTGTTCAACA CCAGCAACAC GTTCTTCGGC
AAGGAAACCA TGAGCCTGCG CGAGCTGCTC AATGCGCTGC GCGAAACCTA TTGCGGCACG
ATAGGCGCCG AATACATGTA CGCCACCGAC CAGAACCAGA AGCGCTGGTG GCAGCAAAAG
TTAGAGAGCA TTCGCAGCAA ACCCAATCTA TCCAAGGAAA AGAAGCTTCA TCTTCTGGAC
CGCCTCTCGG CGGCCGAAGG CCTTGAGCGC TTTTTGCACA CGAAGTACGT GGGTCAGAAG
CGTTTCTCGC TCGAAGGCGG CGAAAGCTTC ATTGCCAGCA TGGACGAGCT GATCCAGCGC
GGCGGCGAAA TCGGCGTGCA GGAAATCGTG ATTGGCATGG CGCACCGGGG CCGCCTGAAT
GTGCTGGTCA ACTCCCTGGG CAAGGTGCCG GCCAACCTGT TTGCCGAGTT TGACCATACC
GCGCCTGAAG ACTTGCCAAG CGGCGACGTG AAATACCACC AGGGTTTCAG CTCCGACGTA
ACGACTCCCG GCGGTCCGGT TCACCTGTCG CTGGCGTTCA ATCCGTCGCA CCTTGAAATT
GTGAACCCGG TGGTCGAAGG CTCGGTGCGT GCCCGCATGG ACCGCCGTGC CGACCCCAAA
GGCCTGCAGG TGTTGCCCGT GCTGGTGCAT GGCGATGCTG CGTTTGCTGG GCAGGGCGTG
GTCATGGAAA CACTGGCACT GGCTGAAACC CGTGGTTATT CCACGGGCGG CACGGTCCAT
CTTGTGATCA ACAACCAGAT CGGCTTTACC ACCAGCGATC CGCGCGACAG CCGCTCCACG
CTGTATTGCA CCGACGTCGT CAAGATGATT GAAGCGCCCG TGCTGCACGT CAATGGTGAT
GACCCGGAAG CCGTTGTGCT AGCCACCCAA CTGGCGCTTG AGTTCCGCAT GGAATTCCAG
AAGGATGTCG TGGTTGACAT CATCTGTTTC CGCAAACTGG GCCACAACGA GCAGGACACC
CCGGCGCTGA CCCAGCCGCT GATGTACAAA AAGATTGCGC AGCATCCCGG CACACGCCGC
CTCTATGCCG ACAAGCTGAC AGCGCAAGGC TTTGGCGAAA CGCTGGGCGA CGACATGGTC
AAGGCCACGC GCGCCGCACT GGATGCCGGT AAGAGCACGT TTGACCCGGT CCTGACCAAC
TTCAAGAGCA AGTACGCAGT GGACTGGAGC CCCTACGTCG GCAAGAAGTG GACCGATGCA
GGCGACACGG CCATTCCCAT GGCCGAGTGG AAACGTCTGG CCACTAAAAT CACGACCATT
CCTGCAACCG TAACGCCGCA CAATCTGGTC AAGAAAGTGT ATGACGACCG CGCAGCCATG
GGGCGTGGCG ATATTCCGGT GGACTGGGGC ATGGGCGAGC ACATGGCTTT TGCATCGCTG
GTGGCCAGCG GCTATCCGGT ACGCCTGTCA GGCGAAGATT GCGGACGCGG AACTTTCACG
CACCGCCATT CCGTGATCCA CGACCAGAGC CGTGAAAAAT GGGATACGGG CACTTACGTG
CCGCTGCAGA ACGTGGCTGA CAATCAGGCT CCGTTTGTTG TCATCGACTC GATCCTCTCG
GAAGAAGCCG TGCTGGCCTT TGAGTATGGC TACGCGTCCA ACGATCCAAG CACCATGGTG
ATCTGGGAAG CCCAGTTCGG CGATTTTGCC AATGGCGCTC AAGTGGTGAT TGACCAGTTC
ATTGCGTCTG GCGAAGTCAA ATGGGGCCGT GTCAACGGTA TCACCCTGAT GCTGCCGCAC
GGCTATGAGG GCCAGGGTCC AGAACACAGT TCGGCACGCC TGGAGCGTTT CATGCAGCTG
TCGGCCGATG CCAACATGCA GGTGGTCCAG CCGACCACCG CCAGCCAGAT TTTCCATGTG
CTGCGTCGCC AGATGGTACG CAACCTGCGC AAGCCGCTGA TCATCATGAC GCCGAAGTCG
CTGCTGCGCA ACAAGGACGC GACTTCGCCG CTGTCCGAGT TCACCAAGGG CGCTTTTCAG
ACCGTCATTC CCGAGAACAA GGAAGAGATC ATCAAAAAGG CCGATAAGGT CAGGCGGATC
GTGGCCTGTT CCGGCAAGGT GTATTACGAC CTGGTCAAGA AGCGTGAGGA AAAAGGCATT
GATGATGTCG TGATCCTTCG TGTCGAGCAG CTCTACCCCT TCCCGCACAA GGCTTTTGCC
GCCGAGTTGA AAAAATATCC CAATGCCGCC GACATCGTGT GGTGCCAGGA TGAGCCGCAA
AACCAGGGAG CCTGGTTCTT TGTGCAGCAC TACATCCATG AGAACATGCT TGACGGCCAA
AAGCTGGGCT ATTCGGGACG CGCAGCGTCG GCTTCTCCAG CCGTCGGTTA TTCGCATCTG
CATCAGGAGC AGCAAAAGGC GCTGGTGGAC GGCGCATTTT CCAAGTTGAA GGGTTTTATC
CTGACCAAAT AA
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| Protein sequence | MSSNSQSPAS VYTAYQGNTY LFGGNAPYVE EMYENYLANP GSVTDNWREY FDALQHVAAT
DGSNAKDVPH LPVVNAFAER AKQGQTKVVV ASGADSEMGR KRTSVQQLIA AYRNVGARWA
DLDPLKRAER DNIPELDPSF YGFTDADQEI VFNTSNTFFG KETMSLRELL NALRETYCGT
IGAEYMYATD QNQKRWWQQK LESIRSKPNL SKEKKLHLLD RLSAAEGLER FLHTKYVGQK
RFSLEGGESF IASMDELIQR GGEIGVQEIV IGMAHRGRLN VLVNSLGKVP ANLFAEFDHT
APEDLPSGDV KYHQGFSSDV TTPGGPVHLS LAFNPSHLEI VNPVVEGSVR ARMDRRADPK
GLQVLPVLVH GDAAFAGQGV VMETLALAET RGYSTGGTVH LVINNQIGFT TSDPRDSRST
LYCTDVVKMI EAPVLHVNGD DPEAVVLATQ LALEFRMEFQ KDVVVDIICF RKLGHNEQDT
PALTQPLMYK KIAQHPGTRR LYADKLTAQG FGETLGDDMV KATRAALDAG KSTFDPVLTN
FKSKYAVDWS PYVGKKWTDA GDTAIPMAEW KRLATKITTI PATVTPHNLV KKVYDDRAAM
GRGDIPVDWG MGEHMAFASL VASGYPVRLS GEDCGRGTFT HRHSVIHDQS REKWDTGTYV
PLQNVADNQA PFVVIDSILS EEAVLAFEYG YASNDPSTMV IWEAQFGDFA NGAQVVIDQF
IASGEVKWGR VNGITLMLPH GYEGQGPEHS SARLERFMQL SADANMQVVQ PTTASQIFHV
LRRQMVRNLR KPLIIMTPKS LLRNKDATSP LSEFTKGAFQ TVIPENKEEI IKKADKVRRI
VACSGKVYYD LVKKREEKGI DDVVILRVEQ LYPFPHKAFA AELKKYPNAA DIVWCQDEPQ
NQGAWFFVQH YIHENMLDGQ KLGYSGRAAS ASPAVGYSHL HQEQQKALVD GAFSKLKGFI
LTK
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