| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1812 |
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| Symbol | dapD |
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| ID | 4689887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1924731 |
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| End bp | 1925558 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834818 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_982043 |
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| Protein GI | 121604714 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.352527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAG ACAACCTGCA AGCCACCATC GACGCCGCCT GGGAAAACCG CGCCAACCTG
TCGTCTGCCT CGGCGCCCAA AGAGGTTCTG GAGGCCGTCG AGCATGCCAT CGAGCAGCTC
AACAACGGTA CATTGCGCGT GGCCACCCGC GAAGGCGTAG GCCAGTGGAC GGTGCACCAG
TGGCTGAAAA AAGCCGTGCT GCTGAGCTTT CGCCTGAAAG ACAACGAACT GATGCGCGCC
GGCGAACTGG GTTTTTACGA CAAGGTTCCA ACGAAGTTTG CCAACCTGAG CGAGCAGGAA
ATGCGCGCCA CCGGTGTTCG CGTGGTGCCG CCCGCCGTGG CGCGCCGGGG CAGCTTCATC
GCCAAGGGTG CGATTTTGAT GCCCAGCTAC GTCAACATCG GCGCTTACGT CGATGAAGGC
ACGATGGTCG ATACCTGGGC CGCCGTCGGC TCCTGCGCCC AGATCGGCAA GAACGTGCAT
CTGTCGGGCG GCGTCGGCAT TGGCGGCGTG CTGGAGCCGA TGCAGGCCAA CCCGACCATC
ATCGAGGACA ACTGCTTCAT CGGCGCGCGC TCCGAAGTGG TCGAAGGCGT GATCGTCGAG
GAAAACTCGG TGCTGTCGAT GGGTGTGTAC ATCGGCCAGA GCACGCCGAT TTACGACCGT
GAAAGCGACA CCGTGAGCTA CGGCCGCATT CCGGCCGGCT CCGTCGTCGT CTCGGGCAAC
CTGCCCAAGG CCGGCGGCAA ATACAGCCTG TACTGCGCGG TCATCGTCAA GCGCGTGGAT
GCAAAAACCC GCGCCACGAC CAGCCTGAAC GACCTGCTGC GCGACTGA
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| Protein sequence | MTQDNLQATI DAAWENRANL SSASAPKEVL EAVEHAIEQL NNGTLRVATR EGVGQWTVHQ
WLKKAVLLSF RLKDNELMRA GELGFYDKVP TKFANLSEQE MRATGVRVVP PAVARRGSFI
AKGAILMPSY VNIGAYVDEG TMVDTWAAVG SCAQIGKNVH LSGGVGIGGV LEPMQANPTI
IEDNCFIGAR SEVVEGVIVE ENSVLSMGVY IGQSTPIYDR ESDTVSYGRI PAGSVVVSGN
LPKAGGKYSL YCAVIVKRVD AKTRATTSLN DLLRD
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