| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1781 |
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| Symbol | aceE |
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| ID | 4687011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1893611 |
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| End bp | 1896340 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639834787 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_982012 |
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| Protein GI | 121604683 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000127285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000322845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCAGCCA ATCCAGACGA AAACCAACAA GCCGGTATCC CCAATGCGGG TTCCAGCAAT
ACGCAAGACA ACGACACGCA GGAGACGCGC GAGTGGATGG ATGCGCTGTC CGCGGTCATT
GAAAGTGAAG GGCCTGAACG CGCCCACTTC CTGCTTGAGC AACTGCTCGA ACATGCGCGC
CAGAAGAGCA TCGACATGCC CTTTTCGGCC AACACGGGTT ATGTCAACTC GATTGAAACC
GACCAGGAAG AGCGCTCACC CGGCAACCTG CTGATCGAGC AGCGGCTGCG CGCCTACATG
CGCTGGAACG CCATGATCAT GGTGGTCAAG GCCAACCGCC TGCACCCGGC CGATGGCGGC
GATTTGGGCG GGCACATCGG CTCGTTTGCC TCGCTGGCCA GCCTGTTTGG CGCCGGCTTC
AACCATTTCT GGCACGCTGA GAGCGAAAAC CACGGCGGCG ACTGCCTCTA CATCCAGGGC
CATGTGTCGC CCGGCGTGTA TGCCCGTGCC TACCTCGAAG GCCGCCTGAC GGAAGAGCAG
CTGCTCAACT TCCGCCAGGA AGTCGATGGC AAGGGCTTGT CGAGCTACCC GCATCCCAAG
CTGATGCCCA ATTTCTGGCA GTTCCCCACC GTCTCCATGG GCCTTGGCCC GCTGATGGCG
ATTTACCAGG CCCGTTTCCT GAAATACCTG CATGCGCGCG GCATTGCCAA CACCGAAAAC
CGCAAGGTCT GGGTGTTCTG CGGCGACGGC GAGATGGACG AGGTCGAATC GCTGGGCGCC
ATCGGCCTGG CGGCGCGTGA AAACCTCGAC AACCTGGTGT TCGTCATCAA CTGCAACCTG
CAGCGCCTCG ACGGCCCGGT GCGCGGCAAC GGCAAGATCA TCCAGGAACT CGAAGGCGAA
TTCCGCGGCG CCGGCTGGAA CGTCATCAAG CTGATCTGGG GCAGCAGCTG GGATCCGCTG
CTGGCGCGCG ACAAGGACGG CGCGCTGCGC AAGATCATGA TGGAGTGCAA CGACGGCGAT
TACCAGTCGT TCAAGGCCAA CGACGGCGCC TATGTGCGCA AGCATTTCTT CGGCCGCGAC
CCGCGCACGC TGGAAATGGT CGCCAACATG AGCGATGACG ACATCTGGAA GCTCACCCGT
GGCGGCCACG ATTCGCAAAA GGTCTATGCC GCCTTCCATT CGGCCGTCAA CCACACCGGC
CAGCCGAGCG TGCTCCTGAT CAAGACCGTC AAGGGTTTTG GCATGGGCAA GATCGGGGAG
GGCAAGAACA ATGTCCACCA GACCAAGAAG CTCGGCGACG AAGACATCAA GGCCTTCCGC
GACCGCTTCA ACATCCCCAT TCCCGACAGC CAGCTGGCCG AACTGCCGTT CTACAAGCCG
GCCGACGACA CGCCTGAAAT GCAGTACCTG CACGAGCGCC GCAAGGCGCT GGGCGGCTAC
CTGCCGCACC GCCGCACCAA GGCGGACGAG AGCTTCACCG TGCCGGCCCT GGAAACTTTC
AAGGCGGTGA TGGACCCCAC GCCAGAAGGC CGCGAAATCT CGACCACCCA GGCCTATGTG
CGCTTCTTGA CGCAACTGCT GCGCGACCAG GCGCTCGGTC CGCGCGTCGT GCCCATCCTG
GTCGATGAAG CCCGCACTTT CGGCATGGAA GGCCTGTTCC GCCAGATCGG CATCTACAAC
CCTGCCGGCC AGCAATACAC CCCGGTCGAT AAAGACCAGG TGATGTATTA CAAGGAAGAC
AAGAAGGGCC AGATCCTGCA GGAAGGCATC AACGAAGCCG GCGGCATGAG CAGCTGGATT
GCGGCGGCCA CTTCGTACAG CACCAACAAC CGCATCATGG TGCCGTTCTA TGTGTATTAC
TCGATGTTCG GCTTCCAGCG CATCGGCGAC CTGGCCTGGG CGGCGGGCGA CATGCAGGCG
CGCGGCTTTC TGCTCGGCGG CACCTCGGGG CGCACCACGC TCAACGGCGA AGGCCTGCAG
CACGAAGACG GCCACAGCCA CATCCTGGCC GGCACGATTC CGAACTGCAT CAGCTACGAC
CCGACCTTTG CGCATGAAGT CGGCGTGATC CTGCACCACG GCTTGAAGCG CATGGTTGAA
AAGCAGGAAA ACGTGTATTT CTACATCACG CTGCTGAACG AGAACTACGC CATGCCCGGC
CTCAAAGCCG GCACCGAAGA GCAGATCATC AAAGGCATGT ACCTGTGCAA CGAAGGCCCC
AAGCTGGCGC CCACCGTGCA ATTGCTGGGC TCGGGCACCA TCCTGCGCGA GTCGATTGCC
GCGCAGGAGC TGTTAGAGAA AGAGTGGGGT GTGTCGGCCA ACGTGTGGAG TTGCCCAAGC
TTCAACGAAC TGGCGCGCGA CGGCCAGAGC GCCGAGCGCT GGAACCTGCT GCATCCGCTG
GAGACGCCGC GCGTTTCCTT TGTAGCCGAA CAACTTGAAG CGTTTGCCGG TCCGGTGGTC
GCCTCGACCG ACTACATGAA GGCCTATGCC GAACAGATCC GCTCCTATAT TCCCAAGGGC
CGTACCTACA AGGTGCTGGG CACCGACGGT TTTGGCCGCA GCGATTTCCG CAGCAAGCTG
CGCGAGCACT TCGAGATCAA CCGCCACTAC ATCGTCGTGG CGGCGCTCAA GGCGCTCAGC
GAAGAGGGCA CGGTGCCGGT CGCCAAGGTG GCCGAAGCCA TCCAGAAGTA CGGCATCAAC
GCCGACAAGA TCAATCCGCT TTACGCTTGA
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| Protein sequence | MAANPDENQQ AGIPNAGSSN TQDNDTQETR EWMDALSAVI ESEGPERAHF LLEQLLEHAR
QKSIDMPFSA NTGYVNSIET DQEERSPGNL LIEQRLRAYM RWNAMIMVVK ANRLHPADGG
DLGGHIGSFA SLASLFGAGF NHFWHAESEN HGGDCLYIQG HVSPGVYARA YLEGRLTEEQ
LLNFRQEVDG KGLSSYPHPK LMPNFWQFPT VSMGLGPLMA IYQARFLKYL HARGIANTEN
RKVWVFCGDG EMDEVESLGA IGLAARENLD NLVFVINCNL QRLDGPVRGN GKIIQELEGE
FRGAGWNVIK LIWGSSWDPL LARDKDGALR KIMMECNDGD YQSFKANDGA YVRKHFFGRD
PRTLEMVANM SDDDIWKLTR GGHDSQKVYA AFHSAVNHTG QPSVLLIKTV KGFGMGKIGE
GKNNVHQTKK LGDEDIKAFR DRFNIPIPDS QLAELPFYKP ADDTPEMQYL HERRKALGGY
LPHRRTKADE SFTVPALETF KAVMDPTPEG REISTTQAYV RFLTQLLRDQ ALGPRVVPIL
VDEARTFGME GLFRQIGIYN PAGQQYTPVD KDQVMYYKED KKGQILQEGI NEAGGMSSWI
AAATSYSTNN RIMVPFYVYY SMFGFQRIGD LAWAAGDMQA RGFLLGGTSG RTTLNGEGLQ
HEDGHSHILA GTIPNCISYD PTFAHEVGVI LHHGLKRMVE KQENVYFYIT LLNENYAMPG
LKAGTEEQII KGMYLCNEGP KLAPTVQLLG SGTILRESIA AQELLEKEWG VSANVWSCPS
FNELARDGQS AERWNLLHPL ETPRVSFVAE QLEAFAGPVV ASTDYMKAYA EQIRSYIPKG
RTYKVLGTDG FGRSDFRSKL REHFEINRHY IVVAALKALS EEGTVPVAKV AEAIQKYGIN
ADKINPLYA
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