Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1776 |
Symbol | |
ID | 4687899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1888171 |
End bp | 1888647 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639834782 |
Product | transcription elongation factor GreA |
Protein accession | YP_982007 |
Protein GI | 121604678 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0106174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCT TACCCATCAC CAAGCGCGGC GCAGAAAAGC TCAAGGCCGA ATTGCACAAC CTCAAGACGG TTCAGCGCCC CTGGGTCATC AACGCGATTT CCGAGGCCAG GGCCCAGGGC GACCTGAGCG AGAACGCCGA ATACGAAGTC GCCAAGGACC GCCAGGGCTT TATCGAAGGC CGTATCCAGG AAATCGAGGG CAAGCTGTCC GCCGCCCAGG TCATCGACCC GACCACCTTC GAGACGGGCA CCCGCGTGGT GTTTGGCTCG ACCGTCAAGC TCGAAGACGA AGCCACGGGC GACAGCGTGA CCTACCAGAT CGTCGGTGAA GACGAGGCCG ACATCAAGCT CGGACTGGTC AACATCGGCT CGCCGATTGC CCGCGCATTG ATCGGCAAGG ACGAGGGCGA CAGCGCCGAA GTGCAGGCGC CCGGCGGCAT CCGGCGCTAT GAAATCGTGA CCGTCCTCTA CATCTGA
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Protein sequence | MATLPITKRG AEKLKAELHN LKTVQRPWVI NAISEARAQG DLSENAEYEV AKDRQGFIEG RIQEIEGKLS AAQVIDPTTF ETGTRVVFGS TVKLEDEATG DSVTYQIVGE DEADIKLGLV NIGSPIARAL IGKDEGDSAE VQAPGGIRRY EIVTVLYI
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