Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1768 |
Symbol | lpxD |
ID | 4687777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1878572 |
End bp | 1879639 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639834774 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_981999 |
Protein GI | 121604670 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.297336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0277634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCA GGCTTGCCGA CATGACTGAG TTGCTGGCGG ACAAGGTGCA AGCCGAACTG CTGGGCAATT CGGAGTTGCT GATCGAGCGG CTGTCCACGC TGGAAGCCGC CGGTCCCAAC GACCTGGCAT TCCTCAGCCA TCCGAAGTAC CTCGGCCAGC TTGCGCAGTC TGCGGCCGGC TGCGTGATCG TTGCGCCGTC TGCCCGCGAA GCTGCTCTCA AGCGTGGCCC GTGCATTGTG GTGGACGATC CCTATTATTA CTTTGCGCTG GTCACACAGC TCTGGAAGCG GCAACATTTT CCAGGCGCGG CGCCGGCCAT CCATGCGAGT GCTTGCATTG ATCCGGCAGC CATCATTTCG CCCCATGTGT CGATAGGCGC TTTTGCATGC ATTGCCGCCG GCGCCGTGAT TGGCGAGGGC GCACGCATTG CGGAGCATTG CGTCATCGGC GCGAATGCCA TCGTCGGCGC AAACAGCCGG CTTTCGGCGC GCGTGACGGT GGCCGACGAT TGCCGCATCG GCGAGCGCTG CATCATTCAT CCGGGAGCGG TGATTGGCGC CGACGGATTC GGTTTTGCGC CGCATGACGG CCAGTGGGTC AAGATCGAGC AGCTCGGCGC CGTGCGGATC GGCAACGATG TGGAAATCGG CGCCAACACC TGCATTGACC GGGGCGCCCT GCAGGACACG GTGATTGAAG ACGGTGTCAA GCTCGACAAT CTGGTGCAGA TTGCGCACAA CGTGCGCGTC GGCAGGCACA GCGCGATGGC GGGCTGCGCG GGCGTGGCCG GCAGCGCCAC GATTGGCGCA CATTGCACGG TCGGCGGCGG CGCCATTGTG CTGGGTCATC TTCGCCTGGC CGATGGCGTG CATGTCTCTG CCGCGTCCAT CGTGACAAGG TCGCTGTTGA AGCCCGGCCA CTACACCGGC CTGTTTCCCA TCGACGACAA TGCCGCCTGG GAAAAAAACG CCGCCACGCT CAAGCAGCTC CATGCGCTGC GTGAACGGCT CAAACAAACT GAAAAATCCC TGCTGCAACT GCAGGGCAGC CTAGAAGAAA AACCATGA
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Protein sequence | MTLRLADMTE LLADKVQAEL LGNSELLIER LSTLEAAGPN DLAFLSHPKY LGQLAQSAAG CVIVAPSARE AALKRGPCIV VDDPYYYFAL VTQLWKRQHF PGAAPAIHAS ACIDPAAIIS PHVSIGAFAC IAAGAVIGEG ARIAEHCVIG ANAIVGANSR LSARVTVADD CRIGERCIIH PGAVIGADGF GFAPHDGQWV KIEQLGAVRI GNDVEIGANT CIDRGALQDT VIEDGVKLDN LVQIAHNVRV GRHSAMAGCA GVAGSATIGA HCTVGGGAIV LGHLRLADGV HVSAASIVTR SLLKPGHYTG LFPIDDNAAW EKNAATLKQL HALRERLKQT EKSLLQLQGS LEEKP
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